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  5. Pp3c5_19350V3.1

Pp3c5_19350V3.1 (Pp3c5_19350)


Aliases : Pp3c5_19350

Description : plant U-box 13


Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_19350V3.1

Target Alias Description ECC score Gene Family Method Actions
Aob_g03476 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g19264 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g06266 PUB14, ATPUB14 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g09615 PUB14, ATPUB14 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo231208 PUB13, ATPUB13 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000225 Armadillo 49 88
IPR000225 Armadillo 175 213
No external refs found!