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  5. Pp3c5_21920V3.1

Pp3c5_21920V3.1 (RPT5A, ATS6A.2, Pp3c5_21920)


Aliases : RPT5A, ATS6A.2, Pp3c5_21920

Description : regulatory particle triple-A ATPase 5A


Gene families : OG0003325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003325_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Pp3c5_21920V3.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00104360 RPT5A, ATS6A.2,... Protein degradation.26S proteasome.regulatory... 0.02 OrthoFinder output from all 47 species
AT3G05530 RPT5A, ATS6A.2 regulatory particle triple-A ATPase 5A 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010505 RPT5B regulatory component *(RPT5) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Ceric.14G077800.1 RPT5A, ATS6A.2,... regulatory component *(RPT5) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001187.20 RPT5A, ATS6A.2 26S proteasome regulatory subunit 6A homolog OS=Oryza... 0.04 OrthoFinder output from all 47 species
Cre10.g439150 RPT5A, ATS6A.2 Protein degradation.26S proteasome.regulatory... 0.03 OrthoFinder output from all 47 species
Dcu_g01308 RPT5A, ATS6A.2 regulatory component *(RPT5) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Dde_g12003 RPT5A, ATS6A.2 regulatory component *(RPT5) of 26S proteasome &... 0.01 OrthoFinder output from all 47 species
Gb_01340 RPT5A, ATS6A.2 regulatory component RPT5 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Gb_25628 RPT5A, ATS6A.2 26S proteasome regulatory subunit 6A homolog OS=Brassica... 0.02 OrthoFinder output from all 47 species
Gb_25630 RPT5A, ATS6A.2 26S proteasome regulatory subunit 6A homolog OS=Solanum... 0.01 OrthoFinder output from all 47 species
LOC_Os02g56000.1 RPT5A, ATS6A.2,... regulatory component RPT5 of 26S proteasome 0.06 OrthoFinder output from all 47 species
LOC_Os06g07630.1 RPT5A, ATS6A.2,... regulatory component RPT5 of 26S proteasome 0.01 OrthoFinder output from all 47 species
Mp3g09490.1 RPT5A, ATS6A.2 regulatory component RPT5 of 26S proteasome 0.07 OrthoFinder output from all 47 species
Msp_g05078 RPT5A, ATS6A.2 regulatory component *(RPT5) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Ore_g13206 RPT5A, ATS6A.2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc01g099760.3.1 RPT5A, ATS6A.2,... regulatory component RPT5 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Spa_g12836 RPT5A, ATS6A.2 regulatory component *(RPT5) of 26S proteasome &... 0.01 OrthoFinder output from all 47 species
Tin_g01827 RPT5A, ATS6A.2 regulatory component *(RPT5) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Zm00001e016153_P002 RPT5A, ATS6A.2,... regulatory component RPT5 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Zm00001e031055_P001 RPT5A, ATS6A.2,... regulatory component RPT5 of 26S proteasome 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 365 409
IPR032501 Prot_ATP_ID_OB_C 76 152
IPR003959 ATPase_AAA_core 210 342
No external refs found!