Aliases : Pp3c5_6880
Description : C2H2 and C2HC zinc fingers superfamily protein
Gene families : OG0000096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000096_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pp3c5_6880V3.1 | |
| Cluster | HCCA: Cluster_71 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00009p00194700 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g013397 | ZFP4 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g058601 | ZFP3 | C2H2 subclass ZFP transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Als_g07073 | ZFP1, ATZFP1 | C2H2 subclass ZFP transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Als_g20041 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Als_g27336 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Als_g28323 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene51183.t1 | ZFP5, Aspi01Gene51183 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene51186.t1 | ZFP7, Aspi01Gene51186 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene53966.t1 | RAB, RBE, Aspi01Gene53966 | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene60234.t1 | JGL, NUB, Aspi01Gene60234 | transcriptional regulator *(JAG/NUB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene69616.t1 | Aspi01Gene69616 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0008.g011541 | ZFP10, ATZFP10 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.08G034400.1 | ZFP1, ATZFP1,... | C2H2 subclass ZFP transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g02189 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g31422 | ZFP6 | C2H2 subclass ZFP transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g47144 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g01985 | ZFP7 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g05477 | ZFP11, ATZFP11 | C2H2 subclass ZFP transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g07516 | ZFP3 | C2H2 subclass ZFP transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g22946 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01031007001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.01 | OrthoFinder output from all 47 species | |
| Gb_12546 | ZFP1, ATZFP1 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g57550.1 | LOC_Os02g57550 | C2H2 zinc finger transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os04g50070.1 | ZFP10, ATZFP10,... | C2H2 zinc finger transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os07g40300.1 | ZFP7, LOC_Os07g40300 | C2H2 zinc finger transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| Len_g27971 | ZFP1, ATZFP1 | C2H2 subclass ZFP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g37209 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| MA_10430024g0010 | No alias | C2H2 zinc finger transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g10324 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g10492 | ZFP10, ATZFP10 | C2H2 subclass ZFP transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g11810 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g03600 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Solyc09g089590.1.1 | SUP, FLO10,... | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g29913 | ZFP4 | C2H2 subclass ZFP transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g12736 | ZFP5 | C2H2 subclass ZFP transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e036220_P001 | ZFP8, Zm00001e036220 | C2H2 zinc finger transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e036816_P001 | ZFP6, Zm00001e036816 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e040940_P001 | ATZFP2, ZFP2,... | C2H2 zinc finger transcription factor | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000723 | telomere maintenance | IEP | HCCA |
| MF | GO:0003678 | DNA helicase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0032200 | telomere organization | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
