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  5. Pp3c6_16700V3.1

Pp3c6_16700V3.1 (AMSH1, Pp3c6_16700)


Aliases : AMSH1, Pp3c6_16700

Description : associated molecule with the SH3 domain of STAM 1


Gene families : OG0001591 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001591_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c6_16700V3.1

Target Alias Description ECC score Gene Family Method Actions
AT4G16144 AMSH3 associated molecule with the SH3 domain of STAM 3 0.02 OrthoFinder output from all 47 species
Cba_g03199 AMSH1 deubiquitinase *(AMSH) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17081 AMSH1 deubiquitinase *(AMSH) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000248.12 AMSH2 Vesicle trafficking.endomembrane trafficking.protein... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0139.g022666 AMSH1 deubiquitinase *(AMSH) & original description: CDS=122-1471 0.01 OrthoFinder output from all 47 species
Zm00001e017595_P001 AMSH1, Zm00001e017595 deubiquitinase (AMSH) 0.02 OrthoFinder output from all 47 species
Zm00001e026261_P001 AMSH1, Zm00001e026261 deubiquitinase (AMSH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000555 JAMM/MPN+_dom 437 542
IPR015063 USP8_dimer 69 155
No external refs found!