Pp3c6_7260V3.1 (ABCB19, ATABCB19,...)

Aliases : ABCB19, ATABCB19, MDR1, MDR11, ATPGP19, ATMDR1, ATMDR11, PGP19, Pp3c6_7260

Description : ATP binding cassette subfamily B19

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c6_7260V3.1

Target	Alias	Description	ECC score	Gene Family Method
AT1G02530	PGP12	P-glycoprotein 12	0.01	OrthoFinder output from all 47 species
Adi_g105656	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g26174	No alias	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aop_g13591	PGP6	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aop_g38133	No alias	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene10110.t1	ABCB19,...	ABC-B-type transporter *(AMN3) & original description: none	0.01	OrthoFinder output from all 47 species
Ceric.10G031400.1	PGP13, Ceric.10G031400	subfamily ABCB transporter & original description:...	0.02	OrthoFinder output from all 47 species
Dac_g06939	PGP13	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g39907	No alias	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Dde_g46023	PGP13	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
GSVIVT01021365001	PGP9	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Gb_07563	ABCB19,...	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Gb_08616	ATPGP4, PGP4, ABCB4, MDR4	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Gb_32125	PGP11	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Gb_33057	ABCB19,...	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Gb_33058	ABCB19,...	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Gb_36862	PGP21	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
Len_g54677	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Mp3g11830.1	ABCB19,...	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Msp_g17749	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g18266	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Nbi_g29613	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g20355	PGP21	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g23699	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g22415	ABCB19,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020710	ABCB19,...	not classified & original description: CDS=1-1380	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023107	PGP2	subfamily ABCB transporter & original description: CDS=729-4781	0.01	OrthoFinder output from all 47 species
Solyc03g093650.3.1	Solyc03g093650	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Solyc06g009280.1.1	PGP11, Solyc06g009280	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Spa_g18839	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Spa_g19381	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e028117_P001	PGP11, Zm00001e028117	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	1062	1210
IPR003439	ABC_transporter-like_ATP-bd	425	573
IPR011527	ABC1_TM_dom	84	355
IPR011527	ABC1_TM_dom	722	993

External Links

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Pp3c6_7260V3.1 (ABCB19, ATABCB19,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation