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  5. Pp3c7_18860V3.1

Pp3c7_18860V3.1 (WRKY6, ATWRKY6, Pp3c7_18860)


Aliases : WRKY6, ATWRKY6, Pp3c7_18860

Description : WRKY family transcription factor


Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c7_18860V3.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00243090 WRKY49,... RNA biosynthesis.transcriptional activation.WRKY... 0.01 OrthoFinder output from all 47 species
AMTR_s00077p00103580 WRKY53,... RNA biosynthesis.transcriptional activation.WRKY... 0.01 OrthoFinder output from all 47 species
AMTR_s00089p00116340 WRKY2, ATWRKY2,... RNA biosynthesis.transcriptional activation.WRKY... 0.01 OrthoFinder output from all 47 species
AT1G55600 ATWRKY10, MINI3, WRKY10 WRKY DNA-binding protein 10 0.01 OrthoFinder output from all 47 species
Aspi01Gene52920.t1 ATWRKY71,... WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z080800.1 AtWRKY20,... WRKY-type transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Gb_02351 WRKY42, AtWRKY42 transcription factor (WRKY) 0.01 OrthoFinder output from all 47 species
LOC_Os03g55080.1 ATWRKY57,... transcription factor (WRKY) 0.01 OrthoFinder output from all 47 species
MA_381058g0010 WRKY18, ATWRKY18 transcription factor (WRKY) 0.01 OrthoFinder output from all 47 species
MA_47052g0010 WRKY42, AtWRKY42 transcription factor (WRKY) 0.01 OrthoFinder output from all 47 species
Pp3c22_12880V3.1 ATWRKY50,... WRKY DNA-binding protein 48 0.03 OrthoFinder output from all 47 species
Solyc06g068460.3.1 ATWRKY40,... transcription factor (WRKY) 0.01 OrthoFinder output from all 47 species
Zm00001e029092_P002 ATWRKY24,... transcription factor (WRKY) 0.01 OrthoFinder output from all 47 species
Zm00001e032453_P001 WRKY42,... transcription factor (WRKY) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!