Aliases : Pp3c7_27400
Description : CCCH-type zinc finger family protein
Gene families : OG0000156 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000156_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pp3c7_27400V3.1 | |
| Cluster | HCCA: Cluster_96 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g011581 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g046911 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g103427 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g119607 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g37637 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g14638 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g16223 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g18235 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene04702.t1 | Aspi01Gene04702 | regulatory factor *(TZF) of mRNA stress granule... | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene14516.t1 | Aspi01Gene14516 | regulatory factor *(TZF) of mRNA stress granule... | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene30050.t1 | Aspi01Gene30050 | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g09656 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g48585 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g08570 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g09166 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g16801 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g18498 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01024728001 | No alias | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01032093001 | No alias | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_38616 | No alias | mRNA-binding regulatory factor (TZF) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os07g38090.2 | LOC_Os07g38090 | mRNA-binding regulatory factor (TZF) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g09001 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.01 | OrthoFinder output from all 47 species | |
| Lfl_g05681 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g02564 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g41660 | ATTZF1, ATCTH | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g41768 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c11_27010V3.1 | Pp3c11_27010 | No annotation | 0.05 | OrthoFinder output from all 47 species | |
| Solyc05g052570.3.1 | SZF2, ATSZF2,... | mRNA-binding regulatory factor (TZF) | 0.01 | OrthoFinder output from all 47 species | |
| Solyc06g082010.4.1 | Solyc06g082010 | mRNA-binding regulatory factor (TZF) | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g16529 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e035289_P002 | Zm00001e035289 | mRNA-binding regulatory factor (TZF) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0007165 | signal transduction | IEP | HCCA |
| BP | GO:0007186 | G protein-coupled receptor signaling pathway | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| MF | GO:0031683 | G-protein beta/gamma-subunit complex binding | IEP | HCCA |
| MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
