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  5. Pp3c8_11360V3.1

Pp3c8_11360V3.1 (Pp3c8_11360)


Aliases : Pp3c8_11360

Description : Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein


Gene families : OG0000231 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000231_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c8_11360V3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00174320 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00079p00180800 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
AT1G68380 No alias Core-2/I-branching... 0.02 OrthoFinder output from all 47 species
AT1G73810 No alias Core-2/I-branching... 0.01 OrthoFinder output from all 47 species
AT5G57270 No alias Core-2/I-branching... 0.02 OrthoFinder output from all 47 species
Ala_g25309 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g04348 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09253 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60447.t1 Aspi01Gene60447 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008319001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01011858001 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01031004001 No alias No description available 0.01 OrthoFinder output from all 47 species
LOC_Os01g04210.1 LOC_Os01g04210 no description available(sp|q65xs5|bc10_orysj : 129.0) 0.02 OrthoFinder output from all 47 species
LOC_Os01g65490.1 LOC_Os01g65490 no description available(sp|q65xs5|bc10_orysj : 178.0) 0.02 OrthoFinder output from all 47 species
Len_g11389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_112910g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_112910g0020 No alias no description available(sp|q65xs5|bc10_orysj : 127.0) 0.01 OrthoFinder output from all 47 species
MA_66615g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp4g07380.1 No alias no description available(sp|q65xs5|bc10_orysj : 118.0) 0.02 OrthoFinder output from all 47 species
Mp8g00500.1 No alias no description available(sp|q65xs5|bc10_orysj : 112.0) 0.02 OrthoFinder output from all 47 species
Mp8g13670.1 No alias no description available(sp|q65xs5|bc10_orysj : 104.0) 0.01 OrthoFinder output from all 47 species
Ppi_g33055 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60829 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006751 No alias not classified & original description: CDS=1-447 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0188.g025134 No alias not classified & original description: CDS=180-1349 0.01 OrthoFinder output from all 47 species
Smo102845 No alias No description available 0.03 OrthoFinder output from all 47 species
Zm00001e017003_P001 Zm00001e017003 no description available(sp|q65xs5|bc10_orysj : 104.0) 0.01 OrthoFinder output from all 47 species
Zm00001e017004_P001 Zm00001e017004 no description available(sp|q65xs5|bc10_orysj : 133.0) 0.02 OrthoFinder output from all 47 species
Zm00001e019094_P001 Zm00001e019094 no description available(sp|q65xs5|bc10_orysj : 183.0) 0.01 OrthoFinder output from all 47 species
Zm00001e025751_P001 Zm00001e025751 no description available(sp|q65xs5|bc10_orysj : 124.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003406 Glyco_trans_14 103 187
IPR003406 Glyco_trans_14 20 102
No external refs found!