Pp3c8_17020V3.1 (Pp3c8_17020)

Aliases : Pp3c8_17020

Description : ABC-2 type transporter family protein

Gene families : OG0000888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c8_17020V3.1
Cluster	HCCA: Cluster_30

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00060p00208620	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.02	OrthoFinder output from all 47 species
AT1G53270	No alias	ABC-2 type transporter family protein	0.01	OrthoFinder output from all 47 species
AT4G25750	No alias	ABC-2 type transporter family protein	0.02	OrthoFinder output from all 47 species
Aev_g37051	No alias	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020537.52	No alias	ABC transporter G family member 17 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Dcu_g04073	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01014222001	No alias	ABC transporter G family member 10 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
GSVIVT01022346001	No alias	ABC transporter G family member 5 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
GSVIVT01025582001	No alias	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
GSVIVT01028809001	No alias	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
GSVIVT01037274001	No alias	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
LOC_Os03g17370.1	LOC_Os03g17370	subfamily ABCG transporter	0.01	OrthoFinder output from all 47 species
Len_g50392	No alias	ABC-G-type lipid transporter *(STR) & original description: none	0.02	OrthoFinder output from all 47 species
Mp3g16700.1	No alias	subfamily ABCG transporter	0.01	OrthoFinder output from all 47 species
Nbi_g13207	No alias	ABC-G-type lipid transporter *(STR) & original description: none	0.01	OrthoFinder output from all 47 species
Ore_g26286	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g34030	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Spa_g37465	No alias	ABC-G-type lipid transporter *(STR) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e020697_P001	Zm00001e020697	subfamily ABCG transporter	0.01	OrthoFinder output from all 47 species
Zm00001e036158_P002	Zm00001e036158	subfamily ABCG transporter	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	IEP	HCCA
MF	GO:0008107	galactoside 2-alpha-L-fucosyltransferase activity	IEP	HCCA
MF	GO:0008417	fucosyltransferase activity	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0031127	alpha-(1,2)-fucosyltransferase activity	IEP	HCCA
BP	GO:0042546	cell wall biogenesis	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	167	317

External Links

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Pp3c8_17020V3.1 (Pp3c8_17020)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation