Pp3s48_70V3.1 (Pp3s48_70)

Aliases : Pp3s48_70

Description : RNA polymerase I-associated factor PAF67

Gene families : OG0004705 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004705_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3s48_70V3.1
Cluster	HCCA: Cluster_69

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00109p00071210	evm_27.TU.AmTr_v1...	Protein biosynthesis.translation...	0.01	OrthoFinder output from all 47 species
Aop_g00719	No alias	component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &...	0.03	OrthoFinder output from all 47 species
Cre17.g697450	No alias	Protein biosynthesis.translation...	0.01	OrthoFinder output from all 47 species
Dcu_g05568	No alias	component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &...	0.03	OrthoFinder output from all 47 species
LOC_Os05g13950.1	LOC_Os05g13950	component eIF3l of eIF3 mRNA-to-PIC binding complex	0.02	OrthoFinder output from all 47 species
Mp3g02920.1	No alias	component eIF3l of eIF3 mRNA-to-PIC binding complex	0.01	OrthoFinder output from all 47 species
Smo146079	No alias	Protein biosynthesis.translation...	0.01	OrthoFinder output from all 47 species
Solyc08g068340.3.1	Solyc08g068340	component eIF3l of eIF3 mRNA-to-PIC binding complex	0.01	OrthoFinder output from all 47 species
Zm00001e026109_P001	Zm00001e026109	component eIF3l of eIF3 mRNA-to-PIC binding complex	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003743	translation initiation factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	Interproscan
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEA	Interproscan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR019382	eIF3l	125	518

External Links

No external refs found!