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  5. MA_100287g0010

MA_100287g0010 (CRR22)


Aliases : CRR22

Description : Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana (sp|q9ltv8|pp224_arath : 666.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_100287g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00262470 OTP85 Pentatricopeptide repeat-containing protein At2g02980,... 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00155620 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
AT3G08820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G18520 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G33170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g44680 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g34624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36540 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05719 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06558 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07515 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g17656 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33154 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g56884 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g58336 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g12691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03219 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17248 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene51735.t1 Aspi01Gene51735 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65602.t1 Aspi01Gene65602 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009167 No alias not classified & original description: CDS=1-2571 0.02 OrthoFinder output from all 47 species
Azfi_s0030.g024353 No alias not classified & original description: CDS=25-2709 0.02 OrthoFinder output from all 47 species
Azfi_s0094.g043474 OTP84 not classified & original description: CDS=1-2043 0.03 OrthoFinder output from all 47 species
Azfi_s0128.g048778 No alias not classified & original description: CDS=1-2676 0.03 OrthoFinder output from all 47 species
Azfi_s0171.g055669 No alias not classified & original description: CDS=1-2286 0.02 OrthoFinder output from all 47 species
Cba_g02672 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g03409 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g04691 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20596 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20830 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26543 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29871 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g31382 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67712 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G078100.1 OTP84, Ceric.07G078100 not classified & original description: pacid=50626860... 0.03 OrthoFinder output from all 47 species
Ceric.17G073400.1 OTP86, Ceric.17G073400 not classified & original description: pacid=50617570... 0.02 OrthoFinder output from all 47 species
Ceric.20G040700.1 Ceric.20G040700 not classified & original description: pacid=50566494... 0.02 OrthoFinder output from all 47 species
Ceric.25G011600.1 Ceric.25G011600 not classified & original description: pacid=50594012... 0.02 OrthoFinder output from all 47 species
Ceric.28G065700.1 CRR22, Ceric.28G065700 not classified & original description: pacid=50569957... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g07040 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07560 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g27114 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g33204 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40230 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06366 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07698 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08605 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g26239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g47943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51775 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07340 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12890 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g15730 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g16098 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22016 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22114 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033837001 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
GSVIVT01035491001 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
Gb_02613 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Gb_04785 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
Gb_12372 CRR22 RNA editing factor (OTP82) 0.02 OrthoFinder output from all 47 species
Gb_21047 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
Gb_23967 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Gb_32256 REME1 Pentatricopeptide repeat-containing protein At2g03880,... 0.04 OrthoFinder output from all 47 species
Gb_36839 OTP84 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_40680 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.02 OrthoFinder output from all 47 species
LOC_Os01g74600.1 CRR22, LOC_Os01g74600 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
LOC_Os03g08680.1 LOC_Os03g08680 Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
LOC_Os05g49740.1 EMB2744, LOC_Os05g49740 Pentatricopeptide repeat-containing protein At5g39680... 0.02 OrthoFinder output from all 47 species
Len_g08566 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g24715 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04754 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07787 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07795 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_107723g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_210823g0010 EMB2261 Pentatricopeptide repeat-containing protein At4g37170... 0.04 OrthoFinder output from all 47 species
MA_211508g0010 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
MA_59599g0010 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
MA_74986g0020 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_81514g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Nbi_g08794 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23954 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19854 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008229 No alias not classified & original description: CDS=1-3597 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0143.g022894 No alias not classified & original description: CDS=1-2625 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0165.g024096 OTP86 not classified & original description: CDS=1-2154 0.03 OrthoFinder output from all 47 species
Sam_g02933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11238 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28579 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo181046 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Solyc02g076700.1.1 Solyc02g076700 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Solyc03g115800.1.1 Solyc03g115800 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Spa_g09530 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06393 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17460 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g22809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e018565_P001 Zm00001e018565 Pentatricopeptide repeat-containing protein At3g13880... 0.02 OrthoFinder output from all 47 species
Zm00001e025557_P001 Zm00001e025557 Pentatricopeptide repeat-containing protein At5g56310... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 346 393
IPR002885 Pentatricopeptide_repeat 142 189
IPR002885 Pentatricopeptide_repeat 446 494
IPR002885 Pentatricopeptide_repeat 522 546
IPR002885 Pentatricopeptide_repeat 218 242
IPR002885 Pentatricopeptide_repeat 245 270
IPR002885 Pentatricopeptide_repeat 591 616
IPR032867 DYW_dom 620 744
No external refs found!