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  5. MA_10069449g0010

MA_10069449g0010


Description : xylogen-type arabinogalactan protein


Gene families : OG0000195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10069449g0010
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00240480 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.06 OrthoFinder output from all 47 species
AMTR_s00008p00146780 evm_27.TU.AmTr_v1... Protein YLS3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00119p00120480 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AT1G55260 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT2G13820 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.05 OrthoFinder output from all 47 species
AT3G22600 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT3G22620 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT3G58550 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
Adi_g027936 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g116254 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38941 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06034 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07275 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g15133 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01845.t1 Aspi01Gene01845 arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g02877 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G095500.1 Ceric.05G095500 not classified & original description: pacid=50577222... 0.02 OrthoFinder output from all 47 species
Ceric.09G058500.1 Ceric.09G058500 not classified & original description: pacid=50586776... 0.03 OrthoFinder output from all 47 species
Ceric.12G092700.1 Ceric.12G092700 not classified & original description: pacid=50601364... 0.03 OrthoFinder output from all 47 species
Ceric.33G062100.1 Ceric.33G062100 not classified & original description: pacid=50607508... 0.03 OrthoFinder output from all 47 species
Ceric.35G030300.1 Ceric.35G030300 not classified & original description: pacid=50581753... 0.02 OrthoFinder output from all 47 species
Dac_g15255 No alias arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02508 No alias arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06089 LTPG1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g23599 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22872 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001178001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01001181001 EDA4 No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01001350001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01018008001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01018010001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_01917 No alias classical arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Gb_02443 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Gb_02458 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Gb_06428 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Gb_28256 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os01g59870.1 LOC_Os01g59870 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
LOC_Os03g09230.1 LOC_Os03g09230 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os03g57970.2 LOC_Os03g57970 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
LOC_Os07g07860.1 LOC_Os07g07860 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
LOC_Os07g07930.1 LOC_Os07g07930 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os10g11370.1 LOC_Os10g11370 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g59470 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12260 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25018 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_118281g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_133359g0030 No alias xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
MA_1925g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_26320g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_43542g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_494876g0010 No alias xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
MA_50191g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_9903145g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp8g18180.1 No alias xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Msp_g06695 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g07639 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g23329 No alias arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19919 No alias arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11193 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61681 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008667 No alias not classified & original description: CDS=1-402 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0169.g024328 No alias not classified & original description: CDS=429-857 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0169.g024331 No alias not classified & original description: CDS=1491-1979 0.02 OrthoFinder output from all 47 species
Solyc01g073680.4.1 Solyc01g073680 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Solyc01g105010.3.1 Solyc01g105010 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Solyc03g005210.4.1 Solyc03g005210 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g007460.3.1 Solyc08g007460 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g065440.4.1 EDA4, Solyc09g065440 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g082280.3.1 Solyc09g082280 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Spa_g05603 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005959_P003 Zm00001e005959 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Zm00001e005960_P003 EDA4, Zm00001e005960 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e005961_P001 Zm00001e005961 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Zm00001e022825_P001 Zm00001e022825 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e030289_P001 Zm00001e030289 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e038813_P001 Zm00001e038813 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 12 107
No external refs found!