1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_10287127g0010

MA_10287127g0010 (PIF3, POC1, PAP3)


Aliases : PIF3, POC1, PAP3

Description : transcription factor (bHLH). PIF red/far-red light perception transcriptional regulator


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10287127g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00133p00027110 BPEp, ZCW32,... External stimuli response.light.UV-A/blue... 0.04 OrthoFinder output from all 47 species
AT1G03040 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g041404 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g055289 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058340 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23505 CIB1 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Als_g18457 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33622 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49316 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03428 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29816 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25247.t2 LRL3, Aspi01Gene25247 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32585.t1 LRL3, Aspi01Gene32585 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40584.t1 Aspi01Gene40584 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0054.g033854 No alias bHLH-type transcription factor & original description: CDS=1-1758 0.02 OrthoFinder output from all 47 species
Azfi_s0075.g037605 LRL3 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Cba_g13645 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16591 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06081 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g09859 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25890 RHD6 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12124 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12888 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18466 LRL3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g29687 PIL5, PIF1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018094001 UNE12 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01021787001 UNE12 RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
GSVIVT01023585001 LRL1 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Lfl_g04933 HEC2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Mp6g18480.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Mpzg01410.1 LRL3 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Msp_g46877 RSL2 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18394 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g11151 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19546 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37088 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38938 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g26288 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g26340 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Pir_g50236 PIL5, PIF1 regulatory protein *(PIF) of red/far-red light... 0.02 OrthoFinder output from all 47 species
Pnu_g25850 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02210 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02784 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29684 HEC2 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000859 No alias bHLH-type transcription factor & original description: CDS=1-273 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006090 No alias bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006234 No alias bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013831 SPT bHLH-type transcription factor & original description: CDS=1-1485 0.02 OrthoFinder output from all 47 species
Spa_g08006 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18981 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50491 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13231 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e018857_P002 Zm00001e018857 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Zm00001e030754_P001 LRL1, Zm00001e030754 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e034339_P001 HEC1, Zm00001e034339 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 212 258
No external refs found!