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  5. MA_10427013g0010

MA_10427013g0010 (ATSUG1, RPT6A)


Aliases : ATSUG1, RPT6A

Description : regulatory component RPT6 of 26S proteasome


Gene families : OG0004338 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004338_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10427013g0010

Target Alias Description ECC score Gene Family Method Actions
AT5G19990 ATSUG1, RPT6A regulatory particle triple-A ATPase 6A 0.04 OrthoFinder output from all 47 species
Als_g11448 ATSUG1, RPT6A regulatory component *(RPT6) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Cba_g25263 ATSUG1, RPT6A regulatory component *(RPT6) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Cre04.g216600 ATSUG1, RPT6A Protein degradation.26S proteasome.regulatory... 0.02 OrthoFinder output from all 47 species
Gb_08346 ATSUG1, RPT6A regulatory component RPT6 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Mp1g04290.1 ATSUG1, RPT6A regulatory component RPT6 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Zm00001e024980_P001 ATSUG1, RPT6A,... regulatory component RPT6 of 26S proteasome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 212 345
IPR041569 AAA_lid_3 369 411
IPR032501 Prot_ATP_ID_OB_C 99 154
No external refs found!