Aliases : NRPE9A, NRPB9A, NRPD9A
Description : subunit 9 of RNA polymerase
Gene families : OG0003486 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003486_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00256010 | NRPE9A, NRPB9A,... | RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g006973 | NRPE9A, NRPB9A, NRPD9A | component *(NRPE9) of RNA polymerase V complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g006974 | NRPE9A, NRPB9A, NRPD9A | component *(NRPE9) of RNA polymerase V complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000970.25 | NRPE9A, NRPB9A, NRPD9A | RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01035016001 | NRPE9A, NRPB9A, NRPD9A | RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_02047 | NRPE9B, NRPD9B, NRPB9B | subunit 9 of RNA polymerase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g42395.1 | NRPE9A, NRPB9A,... | subunit 9 of RNA polymerase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g053430.3.1 | NRPE9A, NRPB9A,... | subunit 9 of RNA polymerase | 0.11 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006351 | DNA-templated transcription | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006457 | protein folding | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
| MF | GO:0008097 | 5S rRNA binding | IEP | HCCA |
| MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
| MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| MF | GO:0047429 | nucleoside triphosphate diphosphatase activity | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001529 | DNA-dir_RNA_pol_M/15kDasu | 4 | 35 |
| No external refs found! |
