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  5. MA_10428116g0010

MA_10428116g0010 (MSL10, ATMSL10)


Aliases : MSL10, ATMSL10

Description : mechanosensitive ion channel (MSL)


Gene families : OG0000689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10428116g0010
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AT2G17000 No alias Mechanosensitive ion channel family protein 0.03 OrthoFinder output from all 47 species
Aop_g09653 No alias mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g26359 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g26363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20698.t1 MSL5, Aspi01Gene20698 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G100500.1 MSL5, Ceric.02G100500 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Ceric.02G100600.1 MSL6, Ceric.02G100600 mechanosensitive ion channel *(MSL) & original... 0.02 OrthoFinder output from all 47 species
Ceric.35G012600.1 MSL6, Ceric.35G012600 mechanosensitive ion channel *(MSL) & original... 0.02 OrthoFinder output from all 47 species
Ceric.38G068100.1 MSL5, Ceric.38G068100 mechanosensitive ion channel *(MSL) & original... 0.04 OrthoFinder output from all 47 species
Dac_g12993 MSL6 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10976 MSL4 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11186 MSL6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28112 MSL6 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g15988 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g28577 MSL4 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g47206 No alias mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g10135 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007259_P002 Zm00001e007259 mechanosensitive ion channel (MSL) 0.02 OrthoFinder output from all 47 species
Zm00001e041490_P001 Zm00001e041490 mechanosensitive ion channel (MSL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR006685 MscS_channel 580 785
No external refs found!