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  5. MA_10428207g0020

MA_10428207g0020


Description : Probable pectinesterase 53 OS=Arabidopsis thaliana (sp|q8vyz3|pme53_arath : 132.0)


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10428207g0020
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00085870 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
AMTR_s00007p00264370 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
AMTR_s00027p00247950 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
AMTR_s00056p00166920 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
AT1G05310 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G21610 ATPE11, PE11 pectinesterase 11 0.03 OrthoFinder output from all 47 species
AT2G36700 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G36710 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g01193 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g10289 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g16363 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17009 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g19093 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20976 QRT1 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37035 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38864 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39532 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g40489 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g41068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16581 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20050 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g24708 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26631 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08007 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Als_g12101 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12102 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g12395 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18741 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Als_g47599 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20602 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30459 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g58922 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05795.t1 Aspi01Gene05795 pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene16818.t1 Aspi01Gene16818 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene16842.t2 Aspi01Gene16842 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20189.t1 Aspi01Gene20189 pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene59341.t1 Aspi01Gene59341 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59342.t1 Aspi01Gene59342 pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene59344.t1 Aspi01Gene59344 pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene59345.t1 Aspi01Gene59345 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene59346.t1 Aspi01Gene59346 pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene59347.t1 Aspi01Gene59347 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59354.t1 Aspi01Gene59354 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67011.t1 Aspi01Gene67011 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g008131 No alias pectin methylesterase & original description: CDS=1-870 0.02 OrthoFinder output from all 47 species
Cba_g03729 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.03G008900.1 Ceric.03G008900 pectin methylesterase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.10G071200.1 Ceric.10G071200 pectin methylesterase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.10G076400.1 Ceric.10G076400 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.11G007100.1 Ceric.11G007100 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.11G007600.1 Ceric.11G007600 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.11G007800.1 Ceric.11G007800 not classified & original description: pacid=50595757... 0.03 OrthoFinder output from all 47 species
Ceric.11G007900.1 Ceric.11G007900 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.13G037000.1 Ceric.13G037000 pectin methylesterase & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.13G037300.1 Ceric.13G037300 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.13G037400.1 Ceric.13G037400 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.13G037800.1 Ceric.13G037800 pectin methylesterase & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.13G038200.1 Ceric.13G038200 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.14G062500.1 Ceric.14G062500 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.16G044000.1 Ceric.16G044000 pectin methylesterase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.1Z171200.1 Ceric.1Z171200 pectin methylesterase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.1Z228300.1 Ceric.1Z228300 pectin methylesterase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.1Z239300.1 Ceric.1Z239300 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.21G056100.1 VGDH1, Ceric.21G056100 not classified & original description: pacid=50603924... 0.05 OrthoFinder output from all 47 species
Ceric.26G016900.1 Ceric.26G016900 pectin methylesterase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.29G054600.1 Ceric.29G054600 pectin methylesterase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.35G046900.1 Ceric.35G046900 pectin methylesterase & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.37G019000.1 Ceric.37G019000 pectin methylesterase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.39G035900.1 Ceric.39G035900 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g05020 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07534 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07472 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14896 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16361 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g28954 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g42904 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g51244 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g51672 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g13696 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g33455 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46321 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03343 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09802 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17111 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18839 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19236 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013838001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01015022001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01015290001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01031250001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
Gb_01459 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Gb_01460 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
Gb_23209 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Gb_32012 QRT1 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Gb_39595 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Gb_41519 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os01g44340.1 ATPE11, PE11,... pectin methylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os04g46740.1 LOC_Os04g46740 pectin methylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os05g44600.1 LOC_Os05g44600 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Len_g02282 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g07516 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Len_g13333 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g29036 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g46556 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g53837 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g09832 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15828 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g19805 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37206 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
MA_181657g0020 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
MA_304854g0010 ATPE11, PE11 pectin methylesterase 0.04 OrthoFinder output from all 47 species
MA_6149868g0010 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
Mp2g01420.1 No alias pectin methylesterase 0.05 OrthoFinder output from all 47 species
Mp4g01190.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp5g03920.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp5g03930.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Msp_g04640 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g08120 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08672 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g10586 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37045 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g37315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g38949 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g39582 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g40955 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g44845 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03614 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13329 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24244 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g34778 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20425 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26065 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02205 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g35988 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20339 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g21379 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c12_24000V3.1 Pp3c12_24000 Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
Ppi_g11138 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14779 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g24799 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g25901 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31507 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61465 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63851 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015086 No alias pectin methylesterase & original description: CDS=460-1611 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020122 No alias not classified & original description: CDS=269-877 0.03 OrthoFinder output from all 47 species
Smo81583 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
Solyc01g079180.4.1 Solyc01g079180 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Solyc01g109740.3.1 ATPE11, PE11,... pectin methylesterase 0.04 OrthoFinder output from all 47 species
Solyc07g043240.4.1 Solyc07g043240 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Spa_g11007 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29457 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g37234 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38344 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g40449 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g40908 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g43332 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47305 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49578 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50750 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54582 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01655 No alias pecTin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07049 No alias pecTin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g15602 No alias pecTin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g35486 No alias pecTin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g36990 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g36991 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g43829 No alias pecTin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029074_P001 Zm00001e029074 pectin methylesterase 0.01 OrthoFinder output from all 47 species
Zm00001e033546_P001 Zm00001e033546 pectin methylesterase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 2 82
No external refs found!