MA_10428715g0010 (RPT1A)

Aliases : RPT1A

Description : regulatory component RPT1 of 26S proteasome

Gene families : OG0004346 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004346_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10428715g0010

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00131p00084690	RPT1A,...	Protein degradation.26S proteasome.regulatory...	0.03	OrthoFinder output from all 47 species
Aob_g05064	RPT1A	regulatory component *(RPT1) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Ceric.30G008600.1	RPT1A, Ceric.30G008600	regulatory component *(RPT1) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
Cre14.g625400	RPT1A	Protein degradation.26S proteasome.regulatory...	0.04	OrthoFinder output from all 47 species
GSVIVT01016655001	RPT1A	Protein degradation.26S proteasome.regulatory...	0.02	OrthoFinder output from all 47 species
Len_g10926	RPT1A	regulatory component *(RPT1) of 26S proteasome &...	0.04	OrthoFinder output from all 47 species
Mp2g04840.1	RPT1A	regulatory component RPT1 of 26S proteasome	0.05	OrthoFinder output from all 47 species
Nbi_g10523	RPT1A	regulatory component *(RPT1) of 26S proteasome &...	0.04	OrthoFinder output from all 47 species
Spa_g06127	RPT1A	regulatory component *(RPT1) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
CC	GO:0005741	mitochondrial outer membrane	IEP	HCCA
CC	GO:0005956	protein kinase CK2 complex	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0019207	kinase regulator activity	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
MF	GO:0019887	protein kinase regulator activity	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
CC	GO:0031968	organelle outer membrane	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1902554	serine/threonine protein kinase complex	IEP	HCCA
CC	GO:1902911	protein kinase complex	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	204	336
IPR041569	AAA_lid_3	359	403

External Links

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