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  5. MA_10429045g0010

MA_10429045g0010


Description : ABC transporter B family member 15 OS=Arabidopsis thaliana (sp|q9lhd1|ab15b_arath : 207.0)


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10429045g0010
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
Aob_g24610 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.18G065900.1 PGP2, Ceric.18G065900 subfamily ABCB transporter & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g37248 PGP9 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g38855 PGP11 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g00972 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g09158 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g29451 ABCB19,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g04600.1 PGP11, LOC_Os05g04600 ABC transporter B family member 4 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
LOC_Os05g04610.1 ATPGP4, PGP4,... subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
LOC_Os05g47490.1 PGP11, LOC_Os05g47490 subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
Len_g45184 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57621 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10739 ABCB19,... subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g19646 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g06270.1 PGP20 subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species
Mp2g11920.1 ABCB19,... subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species
Msp_g34237 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g28031 ABCB19,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g49419 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c17_16450V3.1 ABCB19,... ATP binding cassette subfamily B19 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 44 152
No external refs found!