MA_10429891g0010 (SPL2)

Aliases : SPL2

Description : transcription factor (SBP)

Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10429891g0010

Target	Alias	Description	ECC score	Gene Family Method
AT1G02065	SPL8	squamosa promoter binding protein-like 8	0.03	OrthoFinder output from all 47 species
AT1G69170	No alias	Squamosa promoter-binding protein-like (SBP domain)...	0.03	OrthoFinder output from all 47 species
Adi_g068657	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g33190	SPL8	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g27599	AtSPL9, SPL9	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s1820.g107212	No alias	not classified & original description: CDS=1-336	0.04	OrthoFinder output from all 47 species
Dac_g09282	SPL3	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os04g46580.1	SPL3, LOC_Os04g46580	transcription factor (SBP)	0.02	OrthoFinder output from all 47 species
LOC_Os08g39890.1	AtSPL9, SPL9,...	transcription factor (SBP)	0.02	OrthoFinder output from all 47 species
LOC_Os09g31438.1	AtSPL9, SPL9,...	transcription factor (SBP)	0.02	OrthoFinder output from all 47 species
MA_10428252g0010	SPL8	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Nbi_g43554	SPL8	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Solyc07g062980.4.1	SPL3, Solyc07g062980	transcription factor (SBP)	0.04	OrthoFinder output from all 47 species
Solyc10g018780.3.1	SPL8, Solyc10g018780	transcription factor (SBP)	0.02	OrthoFinder output from all 47 species
Spa_g06557	SPL2	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g13068	AtSPL9, SPL9	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0018995	host cellular component	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0046983	protein dimerization activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	5	85

External Links

No external refs found!

MA_10429891g0010 (SPL2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation