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  5. MA_10430083g0010

MA_10430083g0010 (TPL, WSIP1)


Aliases : TPL, WSIP1

Description : transcriptional repressor (TPL). transcriptional co-repressor (TPL/TPR)


Gene families : OG0000427 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000427_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10430083g0010
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00051p00079490 TPR1,... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.05 OrthoFinder output from all 47 species
AT1G15750 TPL, WSIP1 Transducin family protein / WD-40 repeat family protein 0.03 OrthoFinder output from all 47 species
AT3G16830 TPR2 TOPLESS-related 2 0.04 OrthoFinder output from all 47 species
Adi_g003873 TPR1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Adi_g019392 TPR1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Adi_g053090 WSIP2, TPR4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06729 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Ala_g18277 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.05 OrthoFinder output from all 47 species
Als_g26654 TPR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27970 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene54212.t2 TPL, WSIP1,... transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Cba_g61200 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Ceric.07G013800.1 TPL, WSIP1,... transcriptional co-repressor *(TPL/TPR) & original... 0.06 OrthoFinder output from all 47 species
Dac_g14665 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g19733 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g07917 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g25643 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01024440001 TPL, WSIP1 RNA biosynthesis.transcriptional repression.TPL/TPR... 0.03 OrthoFinder output from all 47 species
Gb_32130 TPL, WSIP1 transcriptional repressor (TPL). transcriptional... 0.1 OrthoFinder output from all 47 species
Gb_37153 TPL, WSIP1 transcriptional repressor (TPL). transcriptional... 0.06 OrthoFinder output from all 47 species
LOC_Os03g14980.1 TPR1, LOC_Os03g14980 transcriptional repressor (TPL). transcriptional... 0.06 OrthoFinder output from all 47 species
Lfl_g40403 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.05 OrthoFinder output from all 47 species
MA_16979g0020 TPL, WSIP1 Topless-related protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_98943g0010 TPR2 Protein TPR1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Msp_g15450 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Msp_g32244 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Ore_g04998 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Ore_g17223 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.05 OrthoFinder output from all 47 species
Sam_g16347 No alias transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Sam_g26703 No alias transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Sam_g26704 No alias transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Solyc03g116750.3.1 WSIP2, TPR4,... transcriptional repressor (TPL). transcriptional... 0.02 OrthoFinder output from all 47 species
Zm00001e001080_P001 TPR1, Zm00001e001080 transcriptional repressor (TPL). transcriptional... 0.07 OrthoFinder output from all 47 species
Zm00001e038558_P003 TPR1, Zm00001e038558 transcriptional repressor (TPL). transcriptional... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005534 galactose binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
MF GO:0048029 monosaccharide binding IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 978 1010
IPR001680 WD40_repeat 515 549
No external refs found!