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  5. MA_10430790g0030

MA_10430790g0030 (BBC1, RSU2, ATBBC1)


Aliases : BBC1, RSU2, ATBBC1

Description : component RPL13 of LSU proteome component


Gene families : OG0000911 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000911_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10430790g0030

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00239970 BBC1, RSU2,... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AMTR_s00029p00111280 BBC1, RSU2,... Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
AT3G49010 BBC1, RSU2, ATBBC1 breast basic conserved 1 0.06 OrthoFinder output from all 47 species
AT5G23900 No alias Ribosomal protein L13e family protein 0.03 OrthoFinder output from all 47 species
Adi_g014304 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ala_g07445 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ala_g38739 No alias component *(eL13) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Als_g55345 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aob_g02822 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g01579 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aop_g02719 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aspi01Gene72529.t1 BBC1, RSU2,... component *(eL13) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Azfi_s0050.g031133 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cba_g65571 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020629.36 BBC1, RSU2, ATBBC1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Cre14.g630100 BBC1, RSU2, ATBBC1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 OrthoFinder output from all 47 species
Dac_g06660 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Dac_g15740 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dcu_g00643 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Dcu_g26018 No alias component *(eL13) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dde_g13576 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ehy_g04408 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
GSVIVT01027212001 BBC1, RSU2, ATBBC1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01030767001 BBC1, RSU2, ATBBC1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
LOC_Os06g02510.2 BBC1, RSU2,... component RPL13 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Len_g00988 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Mp1g04920.1 BBC1, RSU2, ATBBC1 component RPL13 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Mp2g19790.1 BBC1, RSU2, ATBBC1 component RPL13 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Nbi_g00223 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pir_g17440 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Pp3c1_26280V3.1 BBC1, RSU2,... breast basic conserved 1 0.03 OrthoFinder output from all 47 species
Ppi_g19558 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ppi_g25357 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g17931 No alias component *(eL13) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Smo165483 BBC1, RSU2, ATBBC1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Smo266648 BBC1, RSU2, ATBBC1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Solyc08g075700.3.1 BBC1, RSU2,... component RPL13 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Solyc12g096150.2.1 BBC1, RSU2,... component RPL13 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Spa_g05295 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Spa_g14938 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Spa_g24037 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Spa_g43259 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Tin_g03031 BBC1, RSU2, ATBBC1 component *(eL13) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Zm00001e018804_P001 BBC1, RSU2,... component RPL13 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Zm00001e028430_P003 BBC1, RSU2,... component RPL13 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Zm00001e031172_P001 BBC1, RSU2,... component RPL13 of LSU proteome component 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR001380 Ribosomal_L13e 45 199
No external refs found!