Description : Ubiquitin-40S ribosomal protein S27a-1 OS=Oryza sativa subsp. japonica (sp|q9arz9|r27aa_orysj : 84.7)
Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_10431748g0010 | |
| Cluster | HCCA: Cluster_93 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aop_g18726 | UBQ14 | UBQ ubiquitin-fold protein & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g70711 | UBQ11 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.27G039400.1 | UBQ3, Ceric.27G039400 | UBQ ubiquitin-fold protein & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g08760.1 | LOC_Os08g08760 | Polyubiquitin 3 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g01986 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g28108 | UBQ11 | UBQ ubiquitin-fold protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g53062 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g20114 | No alias | component *(eS31) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0007034 | vacuolar transport | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000626 | Ubiquitin-like_dom | 3 | 43 |
| No external refs found! |
