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  5. MA_10432670g0010

MA_10432670g0010


Description : Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana (sp|q9s7f4|pp206_arath : 625.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10432670g0010
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AT1G09410 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 OrthoFinder output from all 47 species
AT1G77170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G35030 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G15130 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G23330 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G02750 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G37170 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G38010 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G39680 EMB2744 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G40410 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G52850 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g021679 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g089158 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099198 MEF19 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07446 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19790 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G039400.1 Ceric.03G039400 not classified & original description: pacid=50571919... 0.03 OrthoFinder output from all 47 species
Ceric.12G028500.1 CRR22, Ceric.12G028500 not classified & original description: pacid=50602410... 0.03 OrthoFinder output from all 47 species
Ceric.28G069900.1 Ceric.28G069900 not classified & original description: pacid=50570610... 0.04 OrthoFinder output from all 47 species
Dde_g22114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010647001 SLO1 Pentatricopeptide repeat-containing protein At2g22410,... 0.03 OrthoFinder output from all 47 species
GSVIVT01017763001 No alias Pentatricopeptide repeat-containing protein At4g15720... 0.03 OrthoFinder output from all 47 species
GSVIVT01019408001 No alias Pentatricopeptide repeat-containing protein At4g21300... 0.03 OrthoFinder output from all 47 species
GSVIVT01027504001 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Gb_00194 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Gb_00201 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Gb_00204 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_00360 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_00409 No alias RNA editing factor (SLO2) 0.07 OrthoFinder output from all 47 species
Gb_01648 No alias Putative pentatricopeptide repeat-containing protein... 0.09 OrthoFinder output from all 47 species
Gb_02613 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Gb_02998 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Gb_03136 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.05 OrthoFinder output from all 47 species
Gb_03570 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
Gb_03927 OTP84 Pentatricopeptide repeat-containing protein At2g22070... 0.05 OrthoFinder output from all 47 species
Gb_04091 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_04430 OTP84 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
Gb_04460 No alias Putative pentatricopeptide repeat-containing protein... 0.08 OrthoFinder output from all 47 species
Gb_04533 CRR22 RNA editing factor (OTP82) 0.06 OrthoFinder output from all 47 species
Gb_04616 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_04785 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
Gb_05123 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.07 OrthoFinder output from all 47 species
Gb_05162 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
Gb_05939 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_05942 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_06523 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
Gb_08253 REME1 RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
Gb_08745 CRR22 RNA editing factor (OTP82) 0.07 OrthoFinder output from all 47 species
Gb_08968 CRR2 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Gb_09704 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
Gb_09792 No alias RNA editing factor (MEF7) 0.03 OrthoFinder output from all 47 species
Gb_09794 No alias RNA editing factor (MEF7). RNA editing factor (MEF13) 0.05 OrthoFinder output from all 47 species
Gb_10151 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 OrthoFinder output from all 47 species
Gb_10152 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.06 OrthoFinder output from all 47 species
Gb_10158 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 OrthoFinder output from all 47 species
Gb_10478 CRR22 RNA editing factor (MEF19) 0.04 OrthoFinder output from all 47 species
Gb_10985 OTP84 Pentatricopeptide repeat-containing protein At2g22070... 0.05 OrthoFinder output from all 47 species
Gb_11025 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.08 OrthoFinder output from all 47 species
Gb_11039 VAC1, ECB2, ATECB2 RNA editing factor (CRR21) 0.06 OrthoFinder output from all 47 species
Gb_11545 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Gb_11905 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
Gb_12004 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
Gb_12554 OTP84 Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
Gb_13221 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.06 OrthoFinder output from all 47 species
Gb_14458 CRR22 Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_15235 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_15588 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.08 OrthoFinder output from all 47 species
Gb_15643 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
Gb_15666 No alias Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Gb_15811 No alias Pentatricopeptide repeat-containing protein At2g39620... 0.05 OrthoFinder output from all 47 species
Gb_16102 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
Gb_16366 CRR22 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Gb_16515 No alias RNA editing factor (MEF11) 0.08 OrthoFinder output from all 47 species
Gb_16828 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
Gb_16895 CRR2 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Gb_16955 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
Gb_16986 CRR22 Pentatricopeptide repeat-containing protein At5g16860... 0.03 OrthoFinder output from all 47 species
Gb_17094 CRR22 RNA editing factor (MEF19) 0.07 OrthoFinder output from all 47 species
Gb_18149 CRR2 OTP70 plastidial RNA splicing factor 0.07 OrthoFinder output from all 47 species
Gb_18600 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 OrthoFinder output from all 47 species
Gb_18788 OTP84 Pentatricopeptide repeat-containing protein At2g22070... 0.05 OrthoFinder output from all 47 species
Gb_19299 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Gb_20266 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.07 OrthoFinder output from all 47 species
Gb_20749 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Gb_20774 CRR22 RNA editing factor (MEF19). RNA editing factor (OTP82) 0.06 OrthoFinder output from all 47 species
Gb_21047 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.06 OrthoFinder output from all 47 species
Gb_21054 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 OrthoFinder output from all 47 species
Gb_21055 OTP84 Pentatricopeptide repeat-containing protein DOT4,... 0.06 OrthoFinder output from all 47 species
Gb_21056 CRR22 RNA editing factor (OTP82) 0.06 OrthoFinder output from all 47 species
Gb_21351 VAC1, ECB2, ATECB2 RNA editing factor (CRR21) 0.04 OrthoFinder output from all 47 species
Gb_21435 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
Gb_21580 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_21965 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.08 OrthoFinder output from all 47 species
Gb_22288 OTP84 Pentatricopeptide repeat-containing protein DOT4,... 0.05 OrthoFinder output from all 47 species
Gb_22711 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Gb_22805 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_23018 REME1 RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
Gb_23605 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.05 OrthoFinder output from all 47 species
Gb_23924 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_24126 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
Gb_25555 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.11 OrthoFinder output from all 47 species
Gb_25604 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Gb_26057 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.05 OrthoFinder output from all 47 species
Gb_26651 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
Gb_26689 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.06 OrthoFinder output from all 47 species
Gb_26695 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 OrthoFinder output from all 47 species
Gb_27469 CRR22 Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_27833 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_28279 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_29028 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Gb_29868 CRR22 RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
Gb_29877 CRR22 RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
Gb_29879 CRR22 RNA editing factor (MEF19). RNA editing factor (OTP82) 0.06 OrthoFinder output from all 47 species
Gb_30004 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.05 OrthoFinder output from all 47 species
Gb_30661 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_30732 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.05 OrthoFinder output from all 47 species
Gb_31162 REME1 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_31266 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.07 OrthoFinder output from all 47 species
Gb_31474 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.05 OrthoFinder output from all 47 species
Gb_31795 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
Gb_32077 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Gb_32451 CRR22 Pentatricopeptide repeat-containing protein At3g63370,... 0.08 OrthoFinder output from all 47 species
Gb_32456 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.07 OrthoFinder output from all 47 species
Gb_33111 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Gb_33117 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Gb_33135 CRR22 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_33294 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.07 OrthoFinder output from all 47 species
Gb_33374 No alias Pentatricopeptide repeat-containing protein At3g63370,... 0.04 OrthoFinder output from all 47 species
Gb_33537 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Gb_34298 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.08 OrthoFinder output from all 47 species
Gb_34969 No alias Putative pentatricopeptide repeat-containing protein... 0.07 OrthoFinder output from all 47 species
Gb_35395 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_35599 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.06 OrthoFinder output from all 47 species
Gb_35645 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.05 OrthoFinder output from all 47 species
Gb_36676 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_37516 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_38129 OTP84 RNA editing factor (OTP82) 0.06 OrthoFinder output from all 47 species
Gb_38297 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_39558 No alias Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Gb_40472 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
Gb_41317 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
Gb_41753 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
LOC_Os07g47370.1 LOC_Os07g47370 Pentatricopeptide repeat-containing protein At4g32430,... 0.02 OrthoFinder output from all 47 species
LOC_Os08g39130.1 LOC_Os08g39130 Pentatricopeptide repeat-containing protein At2g29760,... 0.03 OrthoFinder output from all 47 species
Len_g03866 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14104 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29491 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g39239 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_107723g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_117650g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_23144g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
MA_59599g0010 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
MA_6329g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_77675g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 OrthoFinder output from all 47 species
MA_858608g0010 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_9463538g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
Nbi_g20273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01992 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03200 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g24442 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35308 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35403 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41731 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g02164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003562_P001 REME1, Zm00001e003562 Pentatricopeptide repeat-containing protein At2g03880,... 0.03 OrthoFinder output from all 47 species
Zm00001e015358_P001 Zm00001e015358 Pentatricopeptide repeat-containing protein At5g39350... 0.02 OrthoFinder output from all 47 species
Zm00001e029450_P001 Zm00001e029450 Pentatricopeptide repeat-containing protein At2g46050,... 0.03 OrthoFinder output from all 47 species
Zm00001e038919_P001 Zm00001e038919 Pentatricopeptide repeat-containing protein At5g15300... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 189 217
IPR002885 Pentatricopeptide_repeat 161 187
IPR002885 Pentatricopeptide_repeat 495 516
IPR002885 Pentatricopeptide_repeat 95 118
IPR002885 Pentatricopeptide_repeat 293 317
IPR002885 Pentatricopeptide_repeat 691 715
IPR002885 Pentatricopeptide_repeat 394 419
IPR002885 Pentatricopeptide_repeat 421 467
IPR002885 Pentatricopeptide_repeat 218 265
IPR002885 Pentatricopeptide_repeat 521 566
IPR002885 Pentatricopeptide_repeat 319 366
IPR002885 Pentatricopeptide_repeat 616 663
IPR032867 DYW_dom 792 877
No external refs found!