Aliases : CRR22
Description : Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana (sp|q9sn39|pp320_arath : 474.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_10432704g0020 | |
| Cluster | HCCA: Cluster_116 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G03540 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g033331 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g049071 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g051856 | RARE1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g055244 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g096701 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g099087 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g21708 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Ala_g17143 | CRR22 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ala_g28308 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g36188 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g06389 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g06888 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07384 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g18892 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g27006 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene02536.t1 | Aspi01Gene02536 | ssDNA-binding protein *(OSB) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene14090.t1 | Aspi01Gene14090 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene15988.t1 | Aspi01Gene15988 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene34104.t1 | OTP84, Aspi01Gene34104 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene34758.t1 | Aspi01Gene34758 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene34798.t1 | Aspi01Gene34798 | ssDNA-binding protein *(OSB) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene34824.t1 | Aspi01Gene34824 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene56965.t1 | Aspi01Gene56965 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene60910.t1 | Aspi01Gene60910 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene65595.t1 | Aspi01Gene65595 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene65851.t1 | Aspi01Gene65851 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0731.g084096 | No alias | not classified & original description: CDS=1-3909 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g04081 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g07724 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g07743 | OTP86 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g20714 | LOI1, MEF11 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g56780 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.04G048900.1 | Ceric.04G048900 | ssDNA-binding protein *(OSB) & original description:... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.04G079600.1 | OTP84, Ceric.04G079600 | not classified & original description: pacid=50631214... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.06G022800.1 | Ceric.06G022800 | not classified & original description: pacid=50620328... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g00755 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g18280 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g18577 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g19094 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g25020 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g31659 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g42858 | CRR22 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g43504 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g23896 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g50245 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g00984 | OSB3 | cofactor of plastid-encoded RNA polymerase *(TAC9) &... | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g15613 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g14130.1 | LOC_Os04g14130 | Pentatricopeptide repeat-containing protein At5g16860... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os06g47920.1 | LOC_Os06g47920 | Pentatricopeptide repeat-containing protein At5g44230... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10138132g0010 | No alias | Pentatricopeptide repeat-containing protein At3g02330,... | 0.07 | OrthoFinder output from all 47 species | |
| Msp_g02475 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g04201 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g09454 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g23110 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g23153 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g28216 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g32054 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g41112 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g46088 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g46847 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g06242 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g06871 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g09573 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g23094 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g24441 | REME1 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ore_g27030 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g30175 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g32143 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g33393 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g04775 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g32595 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g56915 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g15472 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g32959 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g53021 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g61518 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0013.g005803 | No alias | not classified & original description: CDS=32-2446 | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0036.g011560 | No alias | not classified & original description: CDS=661-2424 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g07175 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g11900 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g17656 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g21254 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g25244 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g26079 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g35204 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g35988 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g51263 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Smo132819 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g27589 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g06127 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 287 | 312 |
| IPR002885 | Pentatricopeptide_repeat | 315 | 345 |
| IPR002885 | Pentatricopeptide_repeat | 560 | 584 |
| IPR002885 | Pentatricopeptide_repeat | 216 | 263 |
| IPR002885 | Pentatricopeptide_repeat | 113 | 162 |
| IPR002885 | Pentatricopeptide_repeat | 484 | 532 |
| IPR002885 | Pentatricopeptide_repeat | 348 | 384 |
| No external refs found! |
