Aliases : DCL1, CAF, EMB76, SIN1, ATDCL1, EMB60, SUS1, ASU1
Description : Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica (sp|q8lmr2|dcl1_orysj : 175.0)
Gene families : OG0000378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000378_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G01040 | DCL1, CAF,... | dicer-like 1 | 0.06 | OrthoFinder output from all 47 species | |
| AT5G20320 | DCL4, ATDCL4 | dicer-like 4 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g017408 | DCL1, CAF,... | endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g12492 | DCL4, ATDCL4 | endoribonuclease (DCL4) of transacting siRNA pathway &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g06264 | DCL1, CAF,... | endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene32281.t1 | DCL4, ATDCL4,... | endoribonuclease (DCL4) of transacting siRNA pathway &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G108700.1 | DCL4, ATDCL4,... | endoribonuclease (DCL4) of transacting siRNA pathway &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z277300.1 | DCL1, CAF,... | not classified & original description: pacid=50600427... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.22G041000.1 | DCL1, CAF,... | endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000741.30 | DCL1, CAF,... | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Cre02.g141000 | DCL1, CAF,... | Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g10602 | DCL1, CAF,... | endoribonuclease (DCL2) of transacting siRNA pathway &... | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g13692 | DCL1, CAF,... | endoribonuclease (DCL2) of transacting siRNA pathway &... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g49251 | DCL4, ATDCL4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01001045001 | DCL4, ATDCL4 | RNA biosynthesis.siRNA biogenesis.DRB4-DRB7.1 regulator... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01019052001 | ATDCL2, DCL2 | RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g43050.1 | DCL4, ATDCL4,... | endoribonuclease (DCL4) | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06763 | DCL1, CAF,... | endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10437243g0010 | DCL1, CAF,... | endoribonuclease component DCL1 of DCL1-HYL1 miRNA... | 0.07 | OrthoFinder output from all 47 species | |
| MA_10437243g0020 | DCL1, CAF,... | Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana... | 0.07 | OrthoFinder output from all 47 species | |
| Mp7g11720.1 | DCL4, ATDCL4 | endoribonuclease (DCL3). endoribonuclease (DCL4) | 0.03 | OrthoFinder output from all 47 species | |
| Mp7g12090.1 | DCL1, CAF,... | endoribonuclease component DCL1 of DCL1-HYL1 miRNA... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g07904 | DCL4, ATDCL4 | endoribonuclease (DCL4) of transacting siRNA pathway &... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g16091 | DCL1, CAF,... | endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0021.g008352 | ATDCL3, DCL3 | endoribonuclease (DCL2) of transacting siRNA pathway &... | 0.03 | OrthoFinder output from all 47 species | |
| Smo444049 | DCL1, CAF,... | RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g005030.4.1 | DCL4, ATDCL4,... | endoribonuclease (DCL4). component DRB7 of DRB4-DRB7.1... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc08g067210.3.1 | ATDCL3, DCL3,... | endoribonuclease (DCL3) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004652 | polynucleotide adenylyltransferase activity | IEP | HCCA |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | HCCA |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | HCCA |
| BP | GO:0016311 | dephosphorylation | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016791 | phosphatase activity | IEP | HCCA |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
| BP | GO:0043631 | RNA polyadenylation | IEP | HCCA |
| MF | GO:0070566 | adenylyltransferase activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
