1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_10434075g0010

MA_10434075g0010 (CP31B)


Aliases : CP31B

Description : component psPSRP2 of small ribosomal subunit proteome


Gene families : OG0000715 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000715_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10434075g0010
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00197820 evm_27.TU.AmTr_v1... RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00166p00060690 ATRBP31, CP31,... RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species
AT2G37220 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.04 OrthoFinder output from all 47 species
Adi_g018859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g019288 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g019289 ATRBP31, CP31,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022371 ATRBP31, CP31,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g053286 CP31B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g10264 ATRBP31, CP31,... plastidial ribonucleoprotein *(CP33a) & original... 0.07 OrthoFinder output from all 47 species
Ala_g39448 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g10701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05873 ATRBP31, CP31,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07067 ATRBP31, CP31,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07142 ATRBP31, CP31,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14081 ATRBP31, CP31,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene12453.t1 Aspi01Gene12453 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0037.g026033 No alias not classified & original description: CDS=1-825 0.02 OrthoFinder output from all 47 species
Azfi_s0159.g053948 ATRBP31, CP31,... not classified & original description: CDS=143-1057 0.02 OrthoFinder output from all 47 species
Cba_g67827 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g21785 ATRBP31, CP31,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g00421 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g05227 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00942 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g05650 ATRBP31, CP31,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g10561 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01007596001 CP31B RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01025697001 No alias 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris 0.03 OrthoFinder output from all 47 species
GSVIVT01027917001 No alias 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris 0.03 OrthoFinder output from all 47 species
GSVIVT01032361001 CP31B RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species
Gb_00173 CP31B RNA editing factor (CP31) 0.01 OrthoFinder output from all 47 species
Gb_05747 PDE322, CP33 component psPSRP2 of small ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
Gb_28108 CP31B 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.02 OrthoFinder output from all 47 species
Gb_32176 No alias component psPSRP2 of small ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
LOC_Os02g57010.1 LOC_Os02g57010 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g50110.1 LOC_Os04g50110 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g06450.1 PDE322, CP33,... RNA-binding protein CP33, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os08g44290.1 ATRBP31, CP31,... RNA editing factor (CP31) 0.03 OrthoFinder output from all 47 species
LOC_Os09g39180.1 ATRBP31, CP31,... RNA editing factor (CP31) 0.04 OrthoFinder output from all 47 species
Len_g16035 CP31B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g13800.1 No alias 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.02 OrthoFinder output from all 47 species
Mp3g24820.1 CP31B RNA-binding protein CP31B, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp8g03420.1 No alias 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.06 OrthoFinder output from all 47 species
Msp_g04850 ATRBP31, CP31,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02798 ATRBP31, CP31,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02906 ATRBP31, CP31,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03561 CP31B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19962 CP31B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02206 ATRBP31, CP31,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07061 ATRBP31, CP31,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06203 No alias plastidial ribonucleoprotein *(CP33a) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g33947 No alias plastidial ribonucleoprotein *(CP33a) & original... 0.04 OrthoFinder output from all 47 species
Pp3c12_9890V3.1 Pp3c12_9890 chloroplast RNA-binding protein 29 0.02 OrthoFinder output from all 47 species
Ppi_g02835 ATRBP31, CP31,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18180 ATRBP31, CP31,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015482 ATRBP31, CP31,... not classified & original description: CDS=157-1524 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0122.g021464 CP31B not classified & original description: CDS=19-840 0.05 OrthoFinder output from all 47 species
Sam_g06842 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g006940.4.1 PDE322, CP33,... 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.03 OrthoFinder output from all 47 species
Solyc03g111840.3.1 ATRBP31, CP31,... RNA editing factor (CP31) 0.02 OrthoFinder output from all 47 species
Solyc04g074750.3.1 Solyc04g074750 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana... 0.02 OrthoFinder output from all 47 species
Solyc09g007850.3.1 Solyc09g007850 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana... 0.03 OrthoFinder output from all 47 species
Solyc09g090960.4.1 Solyc09g090960 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana... 0.03 OrthoFinder output from all 47 species
Spa_g07686 ATRBP31, CP31,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g07687 ATRBP31, CP31,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05046 ATRBP31, CP31,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001824_P002 Zm00001e001824 RNA-binding protein CP29B, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e003947_P001 ATRBP31, CP31,... RNA editing factor (CP31) 0.03 OrthoFinder output from all 47 species
Zm00001e010844_P001 Zm00001e010844 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana... 0.02 OrthoFinder output from all 47 species
Zm00001e016211_P001 Zm00001e016211 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.04 OrthoFinder output from all 47 species
Zm00001e022086_P002 ATRBP31, CP31,... RNA editing factor (CP31) 0.03 OrthoFinder output from all 47 species
Zm00001e032835_P001 PDE322, CP33,... RNA-binding protein CP33, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e033465_P001 ATRBP31, CP31,... RNA editing factor (CP31) 0.03 OrthoFinder output from all 47 species
Zm00001e035630_P001 Zm00001e035630 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 262 332
IPR000504 RRM_dom 160 230
No external refs found!