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  5. MA_10434449g0010

MA_10434449g0010


Description : helicase Prp43 of Intron-Lariat Spliceosome complex


Gene families : OG0000184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10434449g0010

Target Alias Description ECC score Gene Family Method Actions
AT1G26370 No alias RNA helicase family protein 0.02 OrthoFinder output from all 47 species
Aev_g11422 No alias RNA helicase *(Prp22) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g01897 No alias RNA helicase *(Prp22) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g23007 No alias RNA helicase Prp43 of Intron-Lariat Spliceosome complex... 0.03 OrthoFinder output from all 47 species
Aop_g07221 No alias RNA helicase Prp43 of Intron-Lariat Spliceosome complex... 0.03 OrthoFinder output from all 47 species
Ceric.34G065000.1 Ceric.34G065000 not classified & original description: pacid=50623415... 0.02 OrthoFinder output from all 47 species
Ehy_g18759 No alias RNA helicase Prp43 of Intron-Lariat Spliceosome complex... 0.02 OrthoFinder output from all 47 species
Lfl_g03223 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Mp4g02780.1 No alias Probable pre-mRNA-splicing factor ATP-dependent RNA... 0.01 OrthoFinder output from all 47 species
Pir_g18506 ESP3, EMB2733 RNA helicase *(Prp2) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g22116 ESP3, EMB2733 RNA helicase *(Prp2) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 374 462
IPR001650 Helicase_C 174 311
IPR011709 DEAD-box_helicase_OB_fold 524 600
No external refs found!