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  5. MA_10434824g0010

MA_10434824g0010


Description : Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana (sp|q9fpt1|ubp12_arath : 90.9)


Gene families : OG0002960 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002960_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10434824g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00122030 evm_27.TU.AmTr_v1... Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Aev_g05545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G070900.1 Ceric.07G070900 not classified & original description: pacid=50626059... 0.03 OrthoFinder output from all 47 species
Dcu_g12067 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01035878001 No alias Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Lfl_g05749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10432878g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp8g09710.1 No alias MATH domain and coiled-coil domain-containing protein... 0.02 OrthoFinder output from all 47 species
Nbi_g24466 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61329 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016184 No alias not classified & original description: CDS=189-5282 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0159.g023847 No alias not classified & original description: CDS=1-5244 0.03 OrthoFinder output from all 47 species
Smo173767 No alias Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc06g017970.4.1 Solyc06g017970 Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 128 234
IPR029448 FANCD2 431 545
IPR029448 FANCD2 668 829
No external refs found!