Description : RING-v-class E3 ligase
Gene families : OG0000484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000484_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G01070 | No alias | RING/FYVE/PHD zinc finger superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G60580 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Als_g38573 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.15G009300.1 | Ceric.15G009300 | E3 ubiquitin ligase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g14801 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g10607 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01034042001 | No alias | No description available | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g05831 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g00704 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g12012 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0028.g009961 | No alias | E3 ubiquitin ligase & original description: CDS=391-1818 | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g006060.3.1 | Solyc03g006060 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| MF | GO:0008131 | primary amine oxidase activity | IEP | HCCA |
| BP | GO:0009308 | amine metabolic process | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | HCCA |
| MF | GO:0016641 | oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor | IEP | HCCA |
| MF | GO:0048038 | quinone binding | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011016 | Znf_RING-CH | 141 | 188 |
| No external refs found! |
