MA_10435641g0010


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 619.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10435641g0010

Target Alias Description ECC score Gene Family Method Actions
AT3G08820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.12 OrthoFinder output from all 47 species
AT3G20730 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G47840 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g002040 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005447 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005601 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g009247 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g023691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g025455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g033266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034839 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035521 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036585 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g036766 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g049631 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058239 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g066620 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067033 CRR21 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g075672 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g078577 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081057 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g087421 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g096856 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g097033 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099166 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g099180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101336 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g104337 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g117974 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g43288 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03235 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03827 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g05671 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05709 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07446 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23735 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g30894 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g32436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g62017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14740 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28682 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g36878 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene01267.t2 CRR2, Aspi01Gene01267 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene02630.t1 CRK8, Aspi01Gene02630 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14256.t1 Aspi01Gene14256 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14575.t1 Aspi01Gene14575 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene24967.t1 Aspi01Gene24967 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30841.t1 OTP82, Aspi01Gene30841 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene65846.t1 OSB3, Aspi01Gene65846 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66046.t1 Aspi01Gene66046 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene72589.t1 MEF22, Aspi01Gene72589 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0008.g011478 No alias not classified & original description: CDS=1-2919 0.01 OrthoFinder output from all 47 species
Cba_g67460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G085300.1 Ceric.09G085300 not classified & original description: pacid=50587383... 0.03 OrthoFinder output from all 47 species
Ceric.21G080700.1 Ceric.21G080700 not classified & original description: pacid=50603857... 0.02 OrthoFinder output from all 47 species
Dac_g02864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19072 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g25032 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28298 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05661 DOT4 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g17291 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06009 OTP84 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g16902 EMB2261 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g23831 OTP84 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g26917 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_00201 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Gb_00862 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_02037 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
Gb_03136 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
Gb_04077 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Gb_04167 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_04430 OTP84 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Gb_04460 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Gb_04533 CRR22 RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
Gb_05123 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
Gb_05554 OTP84 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Gb_06693 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_08834 No alias Pentatricopeptide repeat-containing protein At4g21300... 0.05 OrthoFinder output from all 47 species
Gb_09704 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
Gb_10152 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
Gb_10478 CRR22 RNA editing factor (MEF19) 0.04 OrthoFinder output from all 47 species
Gb_11025 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 OrthoFinder output from all 47 species
Gb_11545 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Gb_11926 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_12556 OTP84 Pentatricopeptide repeat-containing protein At1g20230... 0.04 OrthoFinder output from all 47 species
Gb_12585 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
Gb_13221 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
Gb_14956 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_15588 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 OrthoFinder output from all 47 species
Gb_16515 No alias RNA editing factor (MEF11) 0.03 OrthoFinder output from all 47 species
Gb_18149 CRR2 OTP70 plastidial RNA splicing factor 0.06 OrthoFinder output from all 47 species
Gb_20266 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_20634 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
Gb_21055 OTP84 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
Gb_21351 VAC1, ECB2, ATECB2 RNA editing factor (CRR21) 0.04 OrthoFinder output from all 47 species
Gb_21580 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Gb_21965 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_22288 OTP84 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Gb_22805 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_23088 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Gb_24126 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.05 OrthoFinder output from all 47 species
Gb_25130 EMB2261 Pentatricopeptide repeat-containing protein At3g49170,... 0.04 OrthoFinder output from all 47 species
Gb_25555 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Gb_26571 OTP84 Pentatricopeptide repeat-containing protein At3g12770... 0.05 OrthoFinder output from all 47 species
Gb_26651 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_26689 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
Gb_26695 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_27057 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Gb_27880 DOT4 RNA editing factor (ECB2/VAC1) 0.04 OrthoFinder output from all 47 species
Gb_28037 CRR22 RNA editing factor (MEF19). RNA editing factor (OTP82) 0.05 OrthoFinder output from all 47 species
Gb_28393 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Gb_28582 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_28902 EMB2261 Pentatricopeptide repeat-containing protein At3g49170,... 0.04 OrthoFinder output from all 47 species
Gb_29995 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.05 OrthoFinder output from all 47 species
Gb_30523 CRR22 Pentatricopeptide repeat-containing protein At3g03580... 0.04 OrthoFinder output from all 47 species
Gb_30661 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_31266 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Gb_31474 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.05 OrthoFinder output from all 47 species
Gb_31702 CRR22 RNA editing factor (OTP82) 0.05 OrthoFinder output from all 47 species
Gb_32227 OTP84 Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_32921 OTP84 RNA editing factor (OTP82) 0.05 OrthoFinder output from all 47 species
Gb_33051 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Gb_33294 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Gb_33959 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
Gb_34298 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_35645 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
Gb_36081 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Gb_36538 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.05 OrthoFinder output from all 47 species
Gb_37509 CRR22 Pentatricopeptide repeat-containing protein At3g03580... 0.05 OrthoFinder output from all 47 species
Gb_37516 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_37517 CRR22 RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
Gb_37820 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
Gb_38129 OTP84 RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
Gb_38301 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Gb_39406 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_41325 CRR22 RNA editing factor (MEF19) 0.04 OrthoFinder output from all 47 species
LOC_Os02g01610.1 LOC_Os02g01610 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Len_g04288 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04342 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g47510 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g07749 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g27766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431508g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_658463g0010 OTP84 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Msp_g28529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07049 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000500 CRR22 not classified & original description: CDS=1-1614 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015137 No alias not classified & original description: CDS=1-2661 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015410 No alias not classified & original description: CDS=1-2730 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0105.g020144 No alias not classified & original description: CDS=1-1437 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021986 No alias not classified & original description: CDS=164-3082 0.01 OrthoFinder output from all 47 species
Sam_g24540 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40196 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g50108 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc02g005280.1.1 Solyc02g005280 Pentatricopeptide repeat-containing protein At1g50270... 0.05 OrthoFinder output from all 47 species
Solyc03g007840.1.1 Solyc03g007840 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Solyc03g111210.4.1 Solyc03g111210 RNA editing factor (OTP80) 0.03 OrthoFinder output from all 47 species
Solyc03g116000.1.1 Solyc03g116000 Pentatricopeptide repeat-containing protein At3g47530... 0.04 OrthoFinder output from all 47 species
Solyc04g009000.1.1 Solyc04g009000 RNA editing factor (SLO2) 0.03 OrthoFinder output from all 47 species
Solyc06g009500.1.1 Solyc06g009500 Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
Solyc07g065730.1.1 Solyc07g065730 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Solyc09g059575.1.1 Solyc09g059575 Putative pentatricopeptide repeat-containing protein... 0.17 OrthoFinder output from all 47 species
Solyc09g082450.1.1 Solyc09g082450 RNA editing factor (YS1) 0.02 OrthoFinder output from all 47 species
Solyc11g071370.1.1 PDE247, CLB19,... RNA editing factor (CLB19) 0.06 OrthoFinder output from all 47 species
Solyc12g006575.1.1 OTP82, Solyc12g006575 RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
Tin_g30136 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e013232_P001 Zm00001e013232 Pentatricopeptide repeat-containing protein At2g36730... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 644 668
IPR002885 Pentatricopeptide_repeat 218 244
IPR002885 Pentatricopeptide_repeat 443 466
IPR002885 Pentatricopeptide_repeat 413 436
IPR002885 Pentatricopeptide_repeat 544 568
IPR002885 Pentatricopeptide_repeat 277 303
IPR002885 Pentatricopeptide_repeat 246 275
IPR002885 Pentatricopeptide_repeat 570 618
IPR002885 Pentatricopeptide_repeat 468 516
IPR002885 Pentatricopeptide_repeat 336 384
IPR002885 Pentatricopeptide_repeat 142 190
IPR032867 DYW_dom 743 867
No external refs found!