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  5. MA_10435943g0010

MA_10435943g0010 (At-RSZ22a, RSZ22a)


Aliases : At-RSZ22a, RSZ22a

Description : RSZ21/22 RNA splicing factor


Gene families : OG0001173 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001173_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10435943g0010

Target Alias Description ECC score Gene Family Method Actions
AT1G23860 RSZ21, At-RSZ21,... RS-containing zinc finger protein 21 0.06 OrthoFinder output from all 47 species
AT4G31580 RSZ22, At-RSZ22,... serine/arginine-rich 22 0.04 OrthoFinder output from all 47 species
Adi_g019585 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g020430 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01979 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.17G043100.1 At-RSZ22a,... RNA splicing factor *(RSZ21/22) & original description:... 0.03 OrthoFinder output from all 47 species
Cre09.g408200 At-RSZ22a, RSZ22a RNA processing.RNA splicing.spliceosome-associated... 0.08 OrthoFinder output from all 47 species
Ehy_g06419 RSZ21, At-RSZ21,... RNA splicing factor *(RSZ21/22) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_20020 RSZ21, At-RSZ21,... RSZ21/22 RNA splicing factor 0.03 OrthoFinder output from all 47 species
Len_g19035 At-RSZ22a, RSZ22a not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19889 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06475 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19642 RSZ21, At-RSZ21,... RNA splicing factor *(RSZ21/22) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06025 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16193 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g26279 At-RS2Z, RS2Z32, RSZ32 RNA splicing factor *(RSZ32/33) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51937 At-RSZ22a, RSZ22a not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51941 At-RSZ22a, RSZ22a not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e015077_P001 At-RSZ22a,... RSZ21/22 RNA splicing factor 0.06 OrthoFinder output from all 47 species
Zm00001e016090_P001 At-RSZ22a,... RSZ21/22 RNA splicing factor 0.03 OrthoFinder output from all 47 species
Zm00001e023726_P001 At-RSZ22a,... RSZ21/22 RNA splicing factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 4 61
IPR001878 Znf_CCHC 88 102
No external refs found!