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  5. MA_10436386g0010

MA_10436386g0010 (ATVLN2, VLN2)


Aliases : ATVLN2, VLN2

Description : villin actin-crosslinking factor


Gene families : OG0000479 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000479_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10436386g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00240770 VLN4, ATVLN4,... Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
Ala_g12394 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23196 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14140 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Gb_29105 ATVLN3, VLN3 villin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Gb_29107 ATVLN3, VLN3 villin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Lfl_g04963 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g44292 ATVLN3, VLN3 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13068 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27621 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g04677 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60064 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g09598 ATVLN3, VLN3 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007033_P001 VLN4, ATVLN4,... villin actin-crosslinking factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR007123 Gelsolin-like_dom 150 217
IPR007123 Gelsolin-like_dom 269 337
IPR007123 Gelsolin-like_dom 401 471
IPR007123 Gelsolin-like_dom 34 111
No external refs found!