Aliases : ATRZ-1A
Description : RNA chaperone (RZ1|GR-RBP)
Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00251200 | evm_27.TU.AmTr_v1... | Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00012p00103290 | evm_27.TU.AmTr_v1... | Organelle RRM domain-containing protein 2, mitochondrial... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00013p00256900 | GRP2, ATGRP2,... | RNA processing.organelle machineries.RNA... | 0.08 | OrthoFinder output from all 47 species | |
| AT1G18630 | GR-RBP6 | glycine-rich RNA-binding protein 6 | 0.05 | OrthoFinder output from all 47 species | |
| AT2G37510 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT3G23830 | GR-RBP4, GRP4 | glycine-rich RNA-binding protein 4 | 0.07 | OrthoFinder output from all 47 species | |
| AT4G13850 | GRP2, ATGRP2, GR-RBP2 | glycine-rich RNA-binding protein 2 | 0.03 | OrthoFinder output from all 47 species | |
| AT5G04280 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein with... | 0.03 | OrthoFinder output from all 47 species | |
| AT5G61030 | GR-RBP3 | glycine-rich RNA-binding protein 3 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g006714 | GR-RBP3 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g022151 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g043489 | GRP2, ATGRP2, GR-RBP2 | RNA editing factor *(ORRM3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g20823 | GRP2, ATGRP2, GR-RBP2 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g24232 | GR-RBP4, GRP4 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g01126 | CCR2, ATGRP7,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g01139 | No alias | RNA chaperone *(RZ1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g07242 | GR-RBP4, GRP4 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g21798 | No alias | RNA chaperone *(RZ1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g009723 | No alias | RNA chaperone *(RZ1) & original description: CDS=187-939 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0008.g011258 | CCR2, ATGRP7,... | not classified & original description: CDS=99-740 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g44420 | No alias | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g55600 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.12G018200.1 | Ceric.12G018200 | RNA chaperone *(RZ1) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.30G044500.1 | Ceric.30G044500 | RNA chaperone *(RZ1) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.32G066700.1 | GRP2, ATGRP2,... | not classified & original description: pacid=50597731... | 0.03 | OrthoFinder output from all 47 species | |
| Cre09.g392350 | GRP2, ATGRP2, GR-RBP2 | Glycine-rich RNA-binding protein 2, mitochondrial... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g09825 | GR-RBP4, GRP4 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g33383 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g00500 | CCR2, ATGRP7,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g17136 | GR-RBP4, GRP4 | RNA editing factor *(ORRM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g21349 | CCR2, ATGRP7,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01001672001 | ATRZ-1A | Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01021024001 | GRP2, ATGRP2, GR-RBP2 | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01025527001 | No alias | Organelle RRM domain-containing protein 2, mitochondrial... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g04440.1 | LOC_Os08g04440 | RNA editing factor (ORRM) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g31800.1 | GR-RBP3, LOC_Os12g31800 | RNA editing factor (ORRM) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g03058 | GR-RBP3 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g07508 | No alias | RNA chaperone *(RZ1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g30141 | ATRZ-1A | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g21200.1 | GRP2, ATGRP2, GR-RBP2 | RNA editing factor (ORRM) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g12851 | CCR2, ATGRP7,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g29443 | GR-RBP3 | RNA editing factor *(ORRM3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g00084 | GR-RBP3 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g32937 | CCR2, ATGRP7,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g43423 | CCR1, GR-RBP8,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g03416 | No alias | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g04562 | CCR2, ATGRP7,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g09294 | GR-RBP5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g12375 | GR-RBP4, GRP4 | RNA editing factor *(ORRM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c4_6610V3.1 | GRP2, ATGRP2,... | glycine-rich RNA-binding protein 3 | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g23364 | CCR2, ATGRP7,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g61530 | GR-RBP3 | RNA editing factor *(ORRM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g26696 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g48373 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g52143 | No alias | RNA chaperone *(RZ1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo140819 | GRP2, ATGRP2, GR-RBP2 | RNA processing.organelle machineries.RNA... | 0.02 | OrthoFinder output from all 47 species | |
| Smo406315 | GR-RBP4, GRP4 | Glycine-rich RNA-binding protein 2, mitochondrial... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g071560.4.1 | Solyc03g071560 | RNA chaperone (RZ1|GR-RBP) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g051377.1.1 | CCR2, ATGRP7,... | RNA chaperone (RZ1|GR-RBP) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g081180.2.1 | GR-RBP3, Solyc10g081180 | RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g06392 | No alias | RNA chaperone *(RZ1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g10567 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g12557 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g12968 | GR-RBP4, GRP4 | RNA editing factor *(ORRM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g16011 | ATRZ-1A | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g20439 | GRP2, ATGRP2, GR-RBP2 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g22222 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g22687 | CCR2, ATGRP7,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g00653 | GR-RBP5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g04956 | No alias | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g27808 | GR-RBP4, GRP4 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Tin_g30660 | GR-RBP3 | RNA ediTing factor *(ORRM3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e005260_P002 | Zm00001e005260 | RNA chaperone (RZ1|GR-RBP) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e012278_P001 | Zm00001e012278 | RNA chaperone (RZ1|GR-RBP) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e018330_P004 | GR-RBP3, Zm00001e018330 | RNA editing factor (ORRM) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e028481_P002 | GRP2, ATGRP2,... | RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e033010_P001 | Zm00001e033010 | RNA chaperone (RZ1|GR-RBP) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e040294_P001 | Zm00001e040294 | RNA editing factor (ORRM) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001671 | ATPase activator activity | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| MF | GO:0051087 | chaperone binding | IEP | HCCA |
| MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
| MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
| No external refs found! |
