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MA_10436523g0010


Description : Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana (sp|q67xl4|y3544_arath : 145.0)


Gene families : OG0001914 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001914_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10436523g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00011400 evm_27.TU.AmTr_v1... Uncharacterized CRM domain-containing protein At3g25440,... 0.02 OrthoFinder output from all 47 species
AT3G27550 No alias RNA-binding CRS1 / YhbY (CRM) domain protein 0.04 OrthoFinder output from all 47 species
AT4G13070 No alias RNA-binding CRS1 / YhbY (CRM) domain protein 0.05 OrthoFinder output from all 47 species
Adi_g008013 No alias splicing factor *(CFM9) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g15290 No alias splicing factor *(CFM9) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G126500.1 Ceric.01G126500 splicing factor *(CFM9) & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g01780 No alias splicing factor *(CFM9) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12917 No alias splicing factor *(CFM9) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032387001 No alias Uncharacterized CRM domain-containing protein At3g25440,... 0.06 OrthoFinder output from all 47 species
Len_g36657 No alias splicing factor *(CFM9) & original description: none 0.02 OrthoFinder output from all 47 species
Mp2g03710.1 No alias Uncharacterized CRM domain-containing protein At3g25440,... 0.03 OrthoFinder output from all 47 species
Pir_g66193 RAD23B, RAD23 ubiquitin-proteasome shuttle factor *(RAD23) & original... 0.03 OrthoFinder output from all 47 species
Sam_g08828 No alias splicing factor *(CFM9) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e027517_P001 Zm00001e027517 Uncharacterized CRM domain-containing protein At3g25440,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001890 RNA-binding_CRM 154 237
No external refs found!