Aliases : EDM2
Description : Protein ENHANCED DOWNY MILDEW 2 OS=Arabidopsis thaliana (sp|f4k3g5|edm2_arath : 385.0)
Gene families : OG0001607 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001607_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_10437053g0010 | |
| Cluster | HCCA: Cluster_25 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00055p00187070 | EDM2,... | Protein ENHANCED DOWNY MILDEW 2 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00055p00188210 | EDM2,... | Protein ENHANCED DOWNY MILDEW 2 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AT5G55390 | EDM2 | ENHANCED DOWNY MILDEW 2 | 0.1 | OrthoFinder output from all 47 species | |
| Adi_g055839 | EDM2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g072765 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g086263 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.08 | OrthoFinder output from all 47 species | |
| Aev_g33308 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g08102 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.13 | OrthoFinder output from all 47 species | |
| Als_g15502 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g15466 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g02257 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g21156 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.32G022200.1 | EDM2, Ceric.32G022200 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g20727 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g02046 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_35350 | EDM2 | chromatin-associated epigenetic factor | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os01g32710.1 | EDM2, LOC_Os01g32710 | Protein ENHANCED DOWNY MILDEW 2 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g24930.1 | ELP1, LOC_Os08g24930 | Protein ENHANCED DOWNY MILDEW 2 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g40827 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g02443 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.03 | OrthoFinder output from all 47 species | |
| MA_124481g0010 | ELP1 | Protein ENHANCED DOWNY MILDEW 2 OS=Arabidopsis thaliana... | 0.08 | OrthoFinder output from all 47 species | |
| MA_9815g0020 | No alias | Protein ENHANCED DOWNY MILDEW 2 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g06826 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g04823 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g33823 | EDM2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g36612 | EDM2 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g05463 | EDM2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g34670 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g45102 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g56568 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0027.g009782 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.07 | OrthoFinder output from all 47 species | |
| Solyc10g006090.4.1 | EDM2, Solyc10g006090 | chromatin-associated epigenetic factor | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g09412 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g14839 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromaTin silencing... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e024361_P001 | EDM2, Zm00001e024361 | chromatin-associated epigenetic factor | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003682 | chromatin binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0017069 | snRNA binding | IEP | HCCA |
| MF | GO:0017070 | U6 snRNA binding | IEP | HCCA |
| MF | GO:0030623 | U5 snRNA binding | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
