Aliases : REME1
Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 489.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G05340 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g005637 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g21477 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g30899 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g33956 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g26414 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g38981 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g28230 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g31935 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g37921 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g02602 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g08018 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene34786.t1 | Aspi01Gene34786 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0017.g014562 | No alias | not classified & original description: CDS=131-1849 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0120.g046796 | OTP84 | not classified & original description: CDS=1-2868 | 0.12 | OrthoFinder output from all 47 species | |
| Azfi_s0231.g059276 | No alias | not classified & original description: CDS=103-2055 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0332.g065427 | No alias | not classified & original description: CDS=1-3180 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0470.g072895 | No alias | not classified & original description: CDS=1-1518 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g15334 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g67808 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g75402 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g03373 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g03843 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g03846 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g06637 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g09139 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g16347 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g18279 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g18577 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g19068 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g22189 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g24501 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g25885 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g30064 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g30147 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g31017 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g31221 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g31776 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g34941 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g35657 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g39373 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g42645 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g42996 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g47943 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22734 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g13325 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g17701 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g32620.1 | LOC_Os03g32620 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g24150.1 | LOC_Os05g24150 | Pentatricopeptide repeat-containing protein At2g34400... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g05750.1 | LOC_Os08g05750 | Pentatricopeptide repeat-containing protein At4g16835,... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g03252 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Len_g05443 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g09274 | DOT4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18438 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g24813 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g31725 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Lfl_g07081 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g07499 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g12704 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g14363 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g19879 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g25823 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g28173 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g36336 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g40764 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g34210 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g07070 | CRR22 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g04516 | REME1 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g23601 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g16080 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g17174 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g30421 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g48074 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g53384 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g56908 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0084.g018249 | No alias | ssDNA-binding protein *(OSB) & original description: CDS=114-2492 | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g24540 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g50108 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Smo134538 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g08679 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g09854 | VAC1, ECB2, ATECB2 | ssDNA-binding protein *(OSB) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g10269 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e034478_P001 | Zm00001e034478 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.25 | OrthoFinder output from all 47 species | |
| Zm00001e039394_P003 | Zm00001e039394 | Pentatricopeptide repeat-containing protein At5g04780,... | 0.25 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 258 | 286 |
| IPR002885 | Pentatricopeptide_repeat | 227 | 257 |
| IPR002885 | Pentatricopeptide_repeat | 560 | 588 |
| IPR002885 | Pentatricopeptide_repeat | 493 | 518 |
| IPR002885 | Pentatricopeptide_repeat | 199 | 225 |
| IPR002885 | Pentatricopeptide_repeat | 287 | 315 |
| IPR002885 | Pentatricopeptide_repeat | 418 | 466 |
| IPR002885 | Pentatricopeptide_repeat | 318 | 365 |
| IPR002885 | Pentatricopeptide_repeat | 124 | 171 |
| No external refs found! |
