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  5. MA_110122g0010

MA_110122g0010 (AMS)


Aliases : AMS

Description : transcription factor (bHLH)


Gene families : OG0000267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000267_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_110122g0010
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Adi_g020954 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15646 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11432 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19713 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36020 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68480 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007559 SCRM2, ICE2 bHLH-type transcription factor & original description: CDS=1-894 0.05 OrthoFinder output from all 47 species
Azfi_s0005.g009209 ATBHLH029,... bHLH-type transcription factor & original description: CDS=1-1536 0.02 OrthoFinder output from all 47 species
Ceric.20G044500.1 Ceric.20G044500 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.20G044900.1 Ceric.20G044900 not classified & original description: pacid=50566885... 0.03 OrthoFinder output from all 47 species
Dac_g10528 ATBHLH029,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g42479 ATICE1, ICE1, SCRM bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g27756 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_15579 SCRM2, ICE2 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Gb_36380 No alias transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
LOC_Os04g23550.1 LOC_Os04g23550 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Len_g54056 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_126263g0010 AMS transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_387150g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_666536g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_780853g0010 ATBHLH029,... transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Msp_g07921 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g39417 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18149 ATBHLH029,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g31850 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g32399 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010285 No alias bHLH-type transcription factor & original description: CDS=1-1623 0.03 OrthoFinder output from all 47 species
Sam_g07324 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Smo431375 No alias No description available 0.06 OrthoFinder output from all 47 species
Solyc02g079810.3.1 DYT1, Solyc02g079810 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc05g014590.3.1 Solyc05g014590 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Solyc06g051550.4.1 ATBHLH029,... transcription factor (bHLH). iron uptake transcription factor FIT 0.04 OrthoFinder output from all 47 species
Spa_g04989 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06300 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54653 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008463_P008 Zm00001e008463 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e040186_P002 Zm00001e040186 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e040732_P001 ATBHLH029,... transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 182 224
No external refs found!