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  5. MA_1114215g0010

MA_1114215g0010


Description : Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana (sp|o80871|p2c25_arath : 205.0)


Gene families : OG0001301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001301_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_1114215g0010
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00110200 evm_27.TU.AmTr_v1... Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00078p00164770 evm_27.TU.AmTr_v1... Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aev_g14659 No alias clade B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28060 No alias clade B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06701.t1 Aspi01Gene06701 clade B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G022800.1 Ceric.05G022800 clade B phosphatase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.33G047800.1 Ceric.33G047800 clade B phosphatase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g05168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39979 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g39980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13761 No alias clade B phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g18150.1 LOC_Os03g18150 Probable protein phosphatase 2C 32 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Len_g23780 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10365511g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10430806g0010 No alias Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_10432464g0020 No alias Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
MA_107720g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
MA_1274g0010 No alias Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_128174g0010 PP2C5, ATHPP2C5 Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_12940g0010 No alias histone (H2B) 0.09 OrthoFinder output from all 47 species
MA_134564g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_1556703g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_223907g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_749790g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_77486g0010 No alias Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_8110430g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
MA_9501502g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_9664807g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp6g11540.1 No alias clade B phosphatase 0.02 OrthoFinder output from all 47 species
Nbi_g13572 No alias clade B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g48663 No alias clade B phosphatase & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g24387 No alias clade B phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33412 PP2C5, ATHPP2C5 clade B phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g10522 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10523 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g052520.3.1 Solyc05g052520 Probable protein phosphatase 2C 30 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc06g007190.4.1 Solyc06g007190 Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g16375 No alias clade B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 66 143
IPR001932 PPM-type_phosphatase-like_dom 148 238
No external refs found!