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  5. MA_113501g0010

MA_113501g0010 (LBD12, ASL5, PCK1)


Aliases : LBD12, ASL5, PCK1

Description : transcription factor (AS2/LOB)


Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_113501g0010
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00080p00153120 LBD1,... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 OrthoFinder output from all 47 species
AT2G28500 LBD11 LOB domain-containing protein 11 0.03 OrthoFinder output from all 47 species
AT2G40470 LBD15, ASL11 LOB domain-containing protein 15 0.02 OrthoFinder output from all 47 species
AT4G00220 LBD30, JLO Lateral organ boundaries (LOB) domain family protein 0.02 OrthoFinder output from all 47 species
Adi_g084786 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10153 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g11371 LOB AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48421 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05610 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09772 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15025.t1 LBD19, Aspi01Gene15025 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43012.t1 AS2, Aspi01Gene43012 AS2/LOB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene48773.t1 LBD15, ASL11,... AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69867.t1 LBD15, ASL11,... AS2/LOB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0225.g058902 LBD4 AS2/LOB-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0305.g063899 LBD15, ASL11 AS2/LOB-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.02G060200.1 LBD15, ASL11,... AS2/LOB-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g09508 AS2 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g32484 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13259 AS2 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01024592001 LBD15, ASL11 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 OrthoFinder output from all 47 species
LOC_Os01g14030.1 LBD2, LOC_Os01g14030 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
LOC_Os01g56530.1 LBD20, LOC_Os01g56530 transcription factor (AS2/LOB) 0.05 OrthoFinder output from all 47 species
LOC_Os01g60960.1 LBD15, ASL11,... transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
LOC_Os02g57490.1 LBD16, ASL18,... transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
MA_445236g0010 LBD1 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
MA_9839150g0010 LBD1 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Ore_g40723 AS2 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43400 LBD22 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43402 LBD22 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25313 AS2 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018622 LBD15, ASL11 AS2/LOB-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g10179 No alias AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g091420.2.1 LBD18, Solyc01g091420 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Spa_g04983 LOB AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019004_P002 AS2, Zm00001e019004 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Zm00001e019424_P001 LBD15, ASL11,... transcription factor (AS2/LOB) 0.06 OrthoFinder output from all 47 species
Zm00001e019686_P001 LBD20, Zm00001e019686 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Zm00001e030195_P001 LBD2, Zm00001e030195 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Zm00001e031510_P001 LBD12, ASL5,... transcription factor (AS2/LOB) 0.06 OrthoFinder output from all 47 species
Zm00001e042348_P001 LBD29, ASL16,... transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR004883 LOB 11 108
No external refs found!