Aliases : OTP84
Description : Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana (sp|q9lfl5|pp390_arath : 555.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00270380 | OTP86,... | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00003p00222920 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00032p00177680 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00170p00032020 | OTP86,... | Pentatricopeptide repeat-containing protein At5g16860... | 0.04 | OrthoFinder output from all 47 species | |
| AT4G14850 | LOI1, MEF11 | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G09950 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g033730 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g035521 | OTP82 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g099351 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g25067 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g37757 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g26367 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g35759 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27565 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27895 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g28685 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene34823.t1 | Aspi01Gene34823 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene35048.t1 | Aspi01Gene35048 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene71401.t1 | REME1, Aspi01Gene71401 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0005.g009385 | No alias | not classified & original description: CDS=1-2319 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g05272 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06580 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.04G038000.1 | Ceric.04G038000 | not classified & original description: pacid=50632532... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.06G074600.1 | Ceric.06G074600 | not classified & original description: pacid=50619733... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.23G075300.1 | Ceric.23G075300 | not classified & original description: pacid=50609898... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.28G027300.1 | CRR22, Ceric.28G027300 | not classified & original description: pacid=50569783... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g12748 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g38619 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g43242 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g06479 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08636 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08940 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08943 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g26818 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g40972 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g45946 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g14112 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g12147 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_00194 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_00206 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_01648 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_02998 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_03570 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_04077 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_04430 | OTP84 | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_04460 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_05127 | No alias | Pentatricopeptide repeat-containing protein At3g26540... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_06523 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.08 | OrthoFinder output from all 47 species | |
| Gb_06693 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_07635 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_08036 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_08253 | REME1 | RNA editing factor (OTP82) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_08560 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_09146 | OTP84 | Pentatricopeptide repeat-containing protein At3g03580... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_10270 | No alias | RNA editing factor (MEF8). RNA editing factor (BLX) | 0.06 | OrthoFinder output from all 47 species | |
| Gb_10908 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_10985 | OTP84 | Pentatricopeptide repeat-containing protein At2g22070... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_11025 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_11039 | VAC1, ECB2, ATECB2 | RNA editing factor (CRR21) | 0.07 | OrthoFinder output from all 47 species | |
| Gb_11222 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_11389 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_11545 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_11581 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_11667 | CRR22 | Pentatricopeptide repeat-containing protein At3g03580... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_11905 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_12240 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_12554 | OTP84 | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_13221 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_13717 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_15235 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_15643 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_15666 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_16102 | CRR22 | Pentatricopeptide repeat-containing protein At2g13600... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_16366 | CRR22 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_16955 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_17177 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.09 | OrthoFinder output from all 47 species | |
| Gb_18149 | CRR2 | OTP70 plastidial RNA splicing factor | 0.06 | OrthoFinder output from all 47 species | |
| Gb_18263 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_18788 | OTP84 | Pentatricopeptide repeat-containing protein At2g22070... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_18914 | CRR2 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_20572 | CRR22 | RNA editing factor (CRR21) | 0.06 | OrthoFinder output from all 47 species | |
| Gb_21054 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_21580 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_21965 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_22769 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_23267 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_23320 | CRR22 | RNA editing factor (OTP82) | 0.05 | OrthoFinder output from all 47 species | |
| Gb_23605 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_23924 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_23967 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_25555 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_25604 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_26057 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_26311 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_26581 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_26651 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_27833 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_28664 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_28780 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_29466 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_29534 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_29868 | CRR22 | RNA editing factor (OTP82) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_30004 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_30732 | No alias | Pentatricopeptide repeat-containing protein At3g02330,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_31266 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_31457 | EMB2261 | RNA editing factor (BLX) | 0.05 | OrthoFinder output from all 47 species | |
| Gb_31795 | CRR22 | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_32452 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_32456 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_33411 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_33537 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_33719 | No alias | RNA editing factor (OTP82) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_34297 | CRR22 | RNA editing factor (OTP82) | 0.05 | OrthoFinder output from all 47 species | |
| Gb_34969 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.08 | OrthoFinder output from all 47 species | |
| Gb_35599 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_36085 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_36806 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_37176 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_37624 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_38249 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_38297 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_40472 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g03252 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g04830 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18845 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18984 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g44800 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g55833 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06850 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g32453 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_117650g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_56660g0010 | CRR22 | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | OrthoFinder output from all 47 species | |
| MA_858608g0010 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
| MA_9384g0020 | EMB2261 | Pentatricopeptide repeat-containing protein At3g49170,... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g04385 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g28525 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g46020 | MEF22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g47042 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g20506 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g24704 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g27955 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g01992 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g03200 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g24442 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g35308 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g41731 | OTP82 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g42269 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g11385 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g47021 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g03495 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g06762 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g12786 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g16066 | REME1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g16135 | OTP82 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g16140 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g23584 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g32279 | MEF21 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0017.g007241 | No alias | protein S-acyltransferase *(PAT22) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0018.g007447 | No alias | not classified & original description: CDS=108-3026 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0019.g007796 | No alias | not classified & original description: CDS=1-2022 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0033.g011031 | No alias | not classified & original description: CDS=1-2574 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g11900 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g12540 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo81196 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Smo99756 | No alias | Pentatricopeptide repeat-containing protein At2g39620... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e008200_P001 | Zm00001e008200 | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e039026_P001 | OTP82, Zm00001e039026 | Pentatricopeptide repeat-containing protein At5g48910... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 166 | 213 |
| IPR002885 | Pentatricopeptide_repeat | 510 | 558 |
| IPR002885 | Pentatricopeptide_repeat | 65 | 112 |
| IPR002885 | Pentatricopeptide_repeat | 409 | 457 |
| IPR002885 | Pentatricopeptide_repeat | 274 | 314 |
| IPR032867 | DYW_dom | 661 | 715 |
| IPR002885 | Pentatricopeptide_repeat | 632 | 657 |
| IPR002885 | Pentatricopeptide_repeat | 563 | 586 |
| No external refs found! |
