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  5. MA_123240g0010

MA_123240g0010


Description : no hits & (original description: none)


Gene families : OG0000221 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000221_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_123240g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00251380 evm_27.TU.AmTr_v1... Protein BPS1, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00040p00052950 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Adi_g011624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g024370 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g075559 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g109052 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06585 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g22327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g28173 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07595 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g50790 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54448 BPS1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29556 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g40797 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G039400.1 Ceric.04G039400 not classified & original description: pacid=50630851... 0.03 OrthoFinder output from all 47 species
Ceric.22G029500.1 Ceric.22G029500 not classified & original description: pacid=50614434... 0.02 OrthoFinder output from all 47 species
Ceric.22G030000.1 Ceric.22G030000 not classified & original description: pacid=50614551... 0.04 OrthoFinder output from all 47 species
Ceric.35G009900.1 Ceric.35G009900 not classified & original description: pacid=50581013... 0.03 OrthoFinder output from all 47 species
Dac_g04612 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g13663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19402 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g42208 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g23107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_06674 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_18309 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_18311 No alias Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_18312 No alias Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_22841 No alias Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10430865g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_126973g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_85744g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Msp_g11031 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g18667 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g36211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g31415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo440489 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc04g071480.1.1 Solyc04g071480 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Tin_g11641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009073_P001 Zm00001e009073 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e024656_P001 Zm00001e024656 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR004320 BPS1_pln 28 252
No external refs found!