MA_123810g0010 (OBP4)

Aliases : OBP4

Description : transcription factor (DOF)

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_123810g0010

Target	Alias	Description	ECC score	Gene Family Method
AT5G39660	CDF2	cycling DOF factor 2	0.07	OrthoFinder output from all 47 species
Adi_g012791	CDF3	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Adi_g058001	OBP4	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g074898	TMO6	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Als_g20563	ADOF1, DOF1	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g51755	No alias	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Aob_g07277	DOF2.4, ATDOF2.4	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g08332	CDF2	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g17496	CDF1	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene18363.t1	CRK8, Aspi01Gene18363	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene47016.t1	CDF2, Aspi01Gene47016	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s4159.g118156	TMO6	transcription factor *(DOF) & original description: CDS=1-876	0.02	OrthoFinder output from all 47 species
Cba_g39110	No alias	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Dac_g02618	TMO6	transcription factor *(DOF) & original description: none	0.06	OrthoFinder output from all 47 species
Dac_g16737	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g04903	OBP3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g06183	OBP4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g07633	CDF2	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g37632	OBP4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g16037	ADOF2, DOF2	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g25269	ADOF1, DOF1	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01002242001	ADOF2, DOF2	RNA biosynthesis.transcriptional activation.C2C2...	0.05	OrthoFinder output from all 47 species
GSVIVT01005057001	TMO6	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
GSVIVT01021085001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
Gb_07177	CDF2	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
LOC_Os01g55340.1	LOC_Os01g55340	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os03g16850.1	OBP3, LOC_Os03g16850	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os08g38220.1	LOC_Os08g38220	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Len_g10091	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Len_g20781	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g03006	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g17744	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g26281	OBP4	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g01078	TMO6	transcription factor *(DOF) & original description: none	0.06	OrthoFinder output from all 47 species
Nbi_g01077	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g05845	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g05846	TMO6	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Pir_g05506	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g12534	No alias	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g16291	TMO6	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g26266	CDF3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g46456	CDF2	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g48794	CDF3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g18788	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g08233	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g43089	CDF2	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Sam_g13470	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc05g007880.4.1	CDF1, Solyc05g007880	Cyclic dof factor 2 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
Solyc11g010940.2.1	Solyc11g010940	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Spa_g02206	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g07062	OBP4	transcription factor *(DOF) & original description: none	0.06	OrthoFinder output from all 47 species
Tin_g19759	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e010022_P001	OBP1, Zm00001e010022	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	65	121

External Links

No external refs found!

MA_123810g0010 (OBP4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation