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  5. MA_12540g0010

MA_12540g0010


Description : no hits & (original description: none)


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_12540g0010
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
AT1G09740 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g048389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61758 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g13498 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37226.t1 Aspi01Gene37226 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene62788.t1 Aspi01Gene62788 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z137200.1 Ceric.1Z137200 not classified & original description: pacid=50577014... 0.03 OrthoFinder output from all 47 species
Ehy_g10171 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os12g36630.1 LOC_Os12g36630 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g02644 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_134948g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_7063g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pnu_g29442 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g29455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g014600.3.1 Solyc04g014600 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc06g009050.3.1 Solyc06g009050 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc06g084540.3.1 Solyc06g084540 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g17513 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g21428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019620_P001 Zm00001e019620 Universal stress protein PHOS32 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e027691_P001 Zm00001e027691 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 6 158
No external refs found!