1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_12899g0010

MA_12899g0010


Description : Protein CYPRO4 OS=Cynara cardunculus (sp|p40781|cypr4_cynca : 656.0)


Gene families : OG0002427 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002427_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_12899g0010

Target Alias Description ECC score Gene Family Method Actions
AT4G33400 No alias Vacuolar import/degradation, Vid27-related protein 0.09 OrthoFinder output from all 47 species
Ala_g23497 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Als_g12821 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aop_g00721 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species
Azfi_s0261.g060766 No alias not classified & original description: CDS=317-2245 0.04 OrthoFinder output from all 47 species
Ceric.22G002700.1 Ceric.22G002700 not classified & original description: pacid=50615126... 0.11 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021432.34 No alias Protein CYPRO4 OS=Cynara cardunculus 0.02 OrthoFinder output from all 47 species
Cre16.g657550 No alias Protein CYPRO4 OS=Cynara cardunculus 0.01 OrthoFinder output from all 47 species
Dcu_g09878 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
GSVIVT01009497001 No alias Protein CYPRO4 OS=Cynara cardunculus 0.14 OrthoFinder output from all 47 species
LOC_Os02g08190.1 LOC_Os02g08190 Protein CYPRO4 OS=Cynara cardunculus... 0.13 OrthoFinder output from all 47 species
Len_g12390 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Lfl_g37219 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Msp_g32123 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02206 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g19394 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g078940.3.1 Solyc04g078940 Protein CYPRO4 OS=Cynara cardunculus... 0.09 OrthoFinder output from all 47 species
Spa_g13061 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Tin_g04658 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Zm00001e013808_P001 Zm00001e013808 Protein CYPRO4 OS=Cynara cardunculus... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013863 VID27_C 298 567
No external refs found!