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  5. MA_130450g0010

MA_130450g0010


Description : ubiquitin ligase component Doa10 of ER-associated protein degradation (ERAD) machinery


Gene families : OG0001940 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001940_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_130450g0010

Target Alias Description ECC score Gene Family Method Actions
AT4G34100 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g050431 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g055492 No alias E3 ubiquitin ligase component *(Doa10) of ER-associated... 0.03 OrthoFinder output from all 47 species
Adi_g073698 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21227 No alias E3 ubiquitin ligase component *(Doa10) of ER-associated... 0.03 OrthoFinder output from all 47 species
Aev_g27804 No alias E3 ubiquitin ligase component *(Doa10) of ER-associated... 0.02 OrthoFinder output from all 47 species
Aob_g08474 No alias E3 ubiquitin ligase component *(Doa10) of ER-associated... 0.03 OrthoFinder output from all 47 species
Ceric.22G052000.1 Ceric.22G052000 E3 ubiquitin ligase component *(Doa10) of ER-associated... 0.04 OrthoFinder output from all 47 species
Dcu_g03181 No alias E3 ubiquitin ligase component *(Doa10) of ER-associated... 0.03 OrthoFinder output from all 47 species
Ehy_g09859 No alias E3 ubiquitin ligase component *(Doa10) of ER-associated... 0.02 OrthoFinder output from all 47 species
GSVIVT01022083001 No alias Protein degradation.ER-associated protein degradation... 0.05 OrthoFinder output from all 47 species
GSVIVT01031710001 No alias Protein degradation.ER-associated protein degradation... 0.03 OrthoFinder output from all 47 species
LOC_Os06g43210.1 LOC_Os06g43210 ubiquitin ligase component Doa10 of ER-associated... 0.02 OrthoFinder output from all 47 species
MA_15237g0010 No alias ubiquitin ligase component Doa10 of ER-associated... 0.03 OrthoFinder output from all 47 species
Mp2g15190.1 No alias ubiquitin ligase component Doa10 of ER-associated... 0.02 OrthoFinder output from all 47 species
Msp_g13590 No alias E3 ubiquitin ligase component *(Doa10) of ER-associated... 0.03 OrthoFinder output from all 47 species
Ore_g38213 No alias E3 ubiquitin ligase component *(Doa10) of ER-associated... 0.04 OrthoFinder output from all 47 species
Ppi_g03255 No alias E3 ubiquitin ligase component *(Doa10) of ER-associated... 0.02 OrthoFinder output from all 47 species
Sam_g13534 No alias E3 ubiquitin ligase component *(Doa10) of ER-associated... 0.03 OrthoFinder output from all 47 species
Solyc01g107880.3.1 Solyc01g107880 ubiquitin ligase component Doa10 of ER-associated... 0.04 OrthoFinder output from all 47 species
Spa_g12254 No alias E3 ubiquitin ligase component *(Doa10) of ER-associated... 0.06 OrthoFinder output from all 47 species
Spa_g19268 No alias E3 ubiquitin ligase component *(Doa10) of ER-associated... 0.05 OrthoFinder output from all 47 species
Zm00001e037502_P001 Zm00001e037502 ubiquitin ligase component Doa10 of ER-associated... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 270 316
No external refs found!