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  5. MA_133359g0030

MA_133359g0030


Description : xylogen-type arabinogalactan protein


Gene families : OG0000195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_133359g0030

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00038620 LTPG1,... Cell wall.cutin and suberin.export.LTPG cuticular lipid... 0.03 OrthoFinder output from all 47 species
AMTR_s00048p00225010 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AMTR_s01773p00009760 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G55260 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT2G27130 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT2G44300 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
AT3G22580 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
AT3G58550 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
Aev_g42840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g28872 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g23852 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g15133 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G082200.1 Ceric.01G082200 not classified & original description: pacid=50591603... 0.04 OrthoFinder output from all 47 species
Dac_g12195 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g23599 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001178001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01001181001 EDA4 No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01001350001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
GSVIVT01018008001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 OrthoFinder output from all 47 species
Gb_02443 No alias xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Gb_02455 No alias xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Gb_24349 No alias xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
LOC_Os03g07100.1 LOC_Os03g07100 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os03g58940.1 LOC_Os03g58940 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os06g49770.1 LOC_Os06g49770 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g07790.1 LOC_Os07g07790 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
LOC_Os07g07870.1 LOC_Os07g07870 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
LOC_Os10g11370.1 LOC_Os10g11370 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g14614 No alias arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10069449g0010 No alias xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
MA_133359g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_663956g0010 No alias xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
MA_71069g0010 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Mp8g18180.1 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Ore_g04354 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06116 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17108 No alias arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g23314 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0056.g014600 No alias not classified & original description: CDS=65-802 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0169.g024328 No alias not classified & original description: CDS=429-857 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0169.g024331 No alias not classified & original description: CDS=1491-1979 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s2896.g028490 No alias not classified & original description: CDS=1-624 0.03 OrthoFinder output from all 47 species
Solyc03g005210.4.1 Solyc03g005210 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc06g054030.2.1 Solyc06g054030 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Solyc06g054060.1.1 Solyc06g054060 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Solyc09g065420.3.1 Solyc09g065420 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Solyc09g065430.4.1 Solyc09g065430 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Solyc09g065440.4.1 EDA4, Solyc09g065440 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g082280.3.1 Solyc09g082280 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Solyc09g082290.3.1 Solyc09g082290 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc09g082300.3.1 EDA4, Solyc09g082300 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc11g072030.3.1 Solyc11g072030 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Zm00001e000506_P001 Zm00001e000506 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Zm00001e005959_P003 Zm00001e005959 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Zm00001e005960_P003 EDA4, Zm00001e005960 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e005961_P001 Zm00001e005961 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Zm00001e022825_P001 Zm00001e022825 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e030289_P001 Zm00001e030289 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e033062_P001 Zm00001e033062 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP HCCA
BP GO:0046855 inositol phosphate dephosphorylation IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071545 inositol phosphate catabolic process IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 12 107
No external refs found!