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  5. MA_137800g0010

MA_137800g0010


Description : component mtRPL7/L12 of large ribosomal subunit proteome


Gene families : OG0000926 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000926_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_137800g0010

Target Alias Description ECC score Gene Family Method Actions
AT1G70190 No alias Ribosomal protein L7/L12, oligomerisation;Ribosomal... 0.07 OrthoFinder output from all 47 species
AT3G06040 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.08 OrthoFinder output from all 47 species
AT4G36420 No alias Ribosomal protein L12 family protein 0.09 OrthoFinder output from all 47 species
AT4G37660 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.12 OrthoFinder output from all 47 species
Als_g22832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01020 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g03383 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0331.g065406 No alias not classified & original description: CDS=1-612 0.05 OrthoFinder output from all 47 species
Cba_g11519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G029000.1 Ceric.19G029000 not classified & original description: pacid=50576272... 0.03 OrthoFinder output from all 47 species
Ceric.34G065900.1 Ceric.34G065900 not classified & original description: pacid=50622739... 0.03 OrthoFinder output from all 47 species
Dac_g05009 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g00728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02341 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01856 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01007737001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_16973 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Gb_26365 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
Gb_27679 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
LOC_Os02g10540.1 LOC_Os02g10540 component mtRPL7/L12 of large ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
Lfl_g03909 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g35843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g23110.1 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Pir_g20259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25875 No alias component *(bL12m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Solyc02g031970.1.1 Solyc02g031970 component mtRPL7/L12 of large ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
Solyc02g092300.1.1 Solyc02g092300 component mtRPL7/L12 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Solyc09g010030.3.1 Solyc09g010030 component mtRPL7/L12 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Spa_g15114 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e025012_P001 Zm00001e025012 component mtRPL7/L12 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Zm00001e026468_P001 Zm00001e026468 component mtRPL7/L12 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Zm00001e032350_P001 Zm00001e032350 component mtRPL7/L12 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Zm00001e035594_P001 Zm00001e035594 component mtRPL7/L12 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR008932 Ribosomal_L7/L12_oligo 85 134
IPR013823 Ribosomal_L7/L12_C 150 215
No external refs found!