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  5. MA_13954g0010

MA_13954g0010


Description : no hits & (original description: none)


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_13954g0010
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AT1G11980 RUB3 ubiquitin-related protein 3 0.03 OrthoFinder output from all 47 species
AT5G09340 No alias Ubiquitin family protein 0.01 OrthoFinder output from all 47 species
Ala_g12291 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aob_g21615 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g71259 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18516.t1 UBQ11, Aspi01Gene18516 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20737.t1 UBQ11, Aspi01Gene20737 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G062600.1 UBQ10, Ceric.08G062600 UBQ ubiquitin-fold protein & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.27G039400.1 UBQ3, Ceric.27G039400 UBQ ubiquitin-fold protein & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.29G037800.1 UBQ3, Ceric.29G037800 UBQ ubiquitin-fold protein & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.29G037900.1 UBQ3, Ceric.29G037900 UBQ ubiquitin-fold protein & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g48344 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os10g39590.1 LOC_Os10g39590 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g06287 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g39867 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g23397 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g35753 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17745 UBQ11 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 3 30
No external refs found!