MA_141267g0010 (GLR3.3, ATGLR3.3)

Aliases : GLR3.3, ATGLR3.3

Description : ligand-gated cation channel (GLR)

Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_141267g0010

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00178690	GLR2.7,...	Solute transport.channels.GLR ligand-gated cation channel	0.02	OrthoFinder output from all 47 species
AMTR_s00019p00180640	GLR2.8,...	Solute transport.channels.GLR ligand-gated cation channel	0.04	OrthoFinder output from all 47 species
AMTR_s00019p00180760	GLR2.3,...	Solute transport.channels.GLR ligand-gated cation channel	0.04	OrthoFinder output from all 47 species
AMTR_s00019p00184790	GLR2.7,...	Solute transport.channels.GLR ligand-gated cation channel	0.04	OrthoFinder output from all 47 species
AMTR_s00062p00055860	GLR3.3,...	Solute transport.channels.GLR ligand-gated cation channel	0.02	OrthoFinder output from all 47 species
AT2G24710	GLR2.3, ATGLR2.3	glutamate receptor 2.3	0.03	OrthoFinder output from all 47 species
AT2G24720	GLR2.2, ATGLR2.2	glutamate receptor 2.2	0.05	OrthoFinder output from all 47 species
AT2G29110	GLR2.8, ATGLR2.8	glutamate receptor 2.8	0.02	OrthoFinder output from all 47 species
AT2G29120	GLR2.7, ATGLR2.7	glutamate receptor 2.7	0.04	OrthoFinder output from all 47 species
AT5G11180	ATGLR2.6, GLR2.6	glutamate receptor 2.6	0.04	OrthoFinder output from all 47 species
AT5G11210	GLR2.5, ATGLR2.5	glutamate receptor 2.5	0.03	OrthoFinder output from all 47 species
AT5G48400	ATGLR1.2, GLR1.2	Glutamate receptor family protein	0.04	OrthoFinder output from all 47 species
Cba_g33613	ATGLR3.5, GLR6, GLR3.5	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.01G024600.1	GLUR3, GLR3.4,...	ligand-gated cation channel *(GLR) & original...	0.03	OrthoFinder output from all 47 species
Ceric.23G025200.1	GLR3.3,...	not classified & original description: pacid=50610224...	0.03	OrthoFinder output from all 47 species
GSVIVT01030602001	GLUR3, GLR3.4, ATGLR3.4	Solute transport.channels.GLR ligand-gated cation channel	0.02	OrthoFinder output from all 47 species
GSVIVT01033132001	GLR2.8, ATGLR2.8	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
GSVIVT01033139001	GLR2.7, ATGLR2.7	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
Gb_16131	ATGLR2.9, GLR2.9	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
Gb_27767	GLR3.3, ATGLR3.3	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
LOC_Os07g01310.1	GLUR3, GLR3.4,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Lfl_g29844	ATGLR3.5, GLR6, GLR3.5	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
MA_10426811g0010	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel (GLR)	0.04	OrthoFinder output from all 47 species
MA_10428521g0010	GLR3.3, ATGLR3.3	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
MA_160730g0010	GLR3.3, ATGLR3.3	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
MA_3635444g0010	GLR2.7, ATGLR2.7	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
MA_391859g0010	ATGLR3.2,...	ligand-gated cation channel (GLR)	0.06	OrthoFinder output from all 47 species
MA_9039812g0010	ATGLR3.2,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
MA_9796468g0010	GLR2.7, ATGLR2.7	ligand-gated cation channel (GLR)	0.04	OrthoFinder output from all 47 species
Pir_g47811	GLR2.7, ATGLR2.7	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c15_25650V3.1	GLR3.3,...	glutamate receptor 3.3	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002574	ATGLR3.5, GLR6, GLR3.5	ligand-gated cation channel *(GLR) & original...	0.02	OrthoFinder output from all 47 species
Solyc06g063170.3.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Tin_g08441	ATGLR3.5, GLR6, GLR3.5	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e032646_P001	GLUR3, GLR3.4,...	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004888	transmembrane signaling receptor activity	None	Extended
MF	GO:0004970	ionotropic glutamate receptor activity	IEA	Interproscan
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
MF	GO:0005230	extracellular ligand-gated monoatomic ion channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008066	glutamate receptor activity	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated monoatomic ion channel activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022824	transmitter-gated monoatomic ion channel activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022835	transmitter-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022839	monoatomic ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030594	neurotransmitter receptor activity	None	Extended
MF	GO:0038023	signaling receptor activity	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001828	ANF_lig-bd_rcpt	1	264
IPR019594	Glu/Gly-bd	339	427

External Links

No external refs found!

MA_141267g0010 (GLR3.3, ATGLR3.3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation